Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0055 ATGGACCCTTGGTGGAACTCCGCTGTGGAGCGTCAGGCTCAAGACAGAATTCATCGAATAGGGCAAAACAAACCTACAAGAATTGTGAGGTTTGTGATCGAGAATACAATCGAAGAGAGACTTTTGAAGCTCCAAGAGAAGAGGGAAGTAGTTTTTGAAGGGACTATAGGCGACTCTTTTGAAGATCTGGAGAAATTGACTGTGGAAGACTTCACATTTCTCTTCCAATAA 231 0.4286 MDPWWNSAVERQAQDRIHRIGQNKPTRIVRFVIENTIEERLLKLQEKREVVFEGTIGDSFEDLEKLTVEDFTFLFQ 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0055 76 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 1 72 - -
Lal25g0055 76 PANTHER - 1 72 - -
Lal25g0055 76 Gene3D - 1 75 IPR027417 -
Lal25g0055 76 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 76 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0055 Lal-Chr25 406194 406573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0055 1 75 RAD5 or RAD16-like Gene Family AT1G05120 73.333 5.66e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0055 K15083 - qsu:112039680 120.938