Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0053 ATGATGAGAATAATCCTGAACGACAAAAACAAAAACAATGAAGAAGTGTCAAATGATAATGAAGGTTCTTTGAAGAAGGGGCCATGGACACCAGATGAAGATTCAATATTAATAAATTATGTGAGCAAATATGGTGAAGGGAATTGGAATGCAGTTCAAAAGAATTCTGGGTTGTTAAGGTGTGGAAAAAGTTGTAGACTAAGATGGGTCAATCATCTAAGGCCTAATCTTAAGAAAGGTTCATTTTCTCTTGAAGAAGAACGAATCATTGTTGAACTTCATGCCAAGCACGGAAACAAATGGGCAAGAATGGCTTCAAAGTTACATGGGAGGACTGATAATGAAATAAAGAACTTTTGGAATACTAGAATAAAAAGGTGTGAGAGAGCAGGTTTACCAATTTATCCTCCAGAAATTATACGTGAAGCTACTCTTTACCATCTTCAAGAGGAAAAATATTTTGATAAACCTTATAATAATAATAACAATAATAATAATAATAATAATAATAATAATAACAACTCTCCTCCCTCATTTTCATTATCATTTCCTTCACTGGTTTCTTCATCTTACCCTAACAAGGTCAATAACTCAAACCATTATTCTGCTCTACACCCACCACAGAATCAACAACCTATTTCCCTATATGCTTCTTCATCTTCATCATCCAATTTGTTGAAGTTGAATAACCAAAGTTTTGTTGTTGCTAATAATTCTGATTCACATGGTTACAATTACTCTGCTGGAAGCTTCAACTATAACAATGGATTTAATGCAAAATCTATGCTTCCTCCATTGGTTCCAAGCTCAGTCTCTTCAAGCCAAACACCATCTGACTCAGTTACTCCTACTTCATCCTATGTTAGTGCTGTTGATGGTTCAATGGGAGCTTCAATCATGGTTAATAAGGAATACTATGAGGTTGCACCAAATTCATCTCAAGGAAATAGTGGCTTGTTGGATGCTTTAGTTGTGGAGGGTCAAAGCCTTTCACGTAACAACAAGCCAAGGAGTGAGAATTCAGCAGTAACAGTAGCAGTAGCAGTAGCAGCAGCTGCAGAGAAATCAACTAATAAGAGGAAAAGCATAGTGTTAGAGGAAAATGCAAAGGAGGGAGGAACTAGTAGTGTGTCTATGGCTGTGGAGCCAGTCTTGAAGAAAAGGAAGAAGAAGAACACTGGAGACAATAGTAATGAAACCCTCAAAGGGAAGAAAGAAATTGCAAAGGAGCCATTGGATATAGAGGAAACTGTGTGGGATGATGACTTGTTTAGTCTTCTCACTTATTTTCCCATAGAAATGCCAATACCGGATTGGTACCGTAAAGGAGATAAAAGTGAGTCAACAAATTAA 1353 0.3659 MMRIILNDKNKNNEEVSNDNEGSLKKGPWTPDEDSILINYVSKYGEGNWNAVQKNSGLLRCGKSCRLRWVNHLRPNLKKGSFSLEEERIIVELHAKHGNKWARMASKLHGRTDNEIKNFWNTRIKRCERAGLPIYPPEIIREATLYHLQEEKYFDKPYNNNNNNNNNNNNNNNNSPPSFSLSFPSLVSSSYPNKVNNSNHYSALHPPQNQQPISLYASSSSSSNLLKLNNQSFVVANNSDSHGYNYSAGSFNYNNGFNAKSMLPPLVPSSVSSSQTPSDSVTPTSSYVSAVDGSMGASIMVNKEYYEVAPNSSQGNSGLLDALVVEGQSLSRNNKPRSENSAVTVAVAVAAAAEKSTNKRKSIVLEENAKEGGTSSVSMAVEPVLKKRKKKNTGDNSNETLKGKKEIAKEPLDIEETVWDDDLFSLLTYFPIEMPIPDWYRKGDKSESTN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0053 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Lal25g0053 450 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 11 446 - -
Lal25g0053 450 MobiDBLite consensus disorder prediction 369 404 - -
Lal25g0053 450 CDD SANT 81 122 IPR001005 -
Lal25g0053 450 SMART sant 78 126 IPR001005 -
Lal25g0053 450 SMART sant 25 75 IPR001005 -
Lal25g0053 450 CDD SANT 28 73 IPR001005 -
Lal25g0053 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 73 IPR017930 -
Lal25g0053 450 MobiDBLite consensus disorder prediction 1 28 - -
Lal25g0053 450 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Lal25g0053 450 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Lal25g0053 450 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Lal25g0053 450 MobiDBLite consensus disorder prediction 155 179 - -
Lal25g0053 450 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Lal25g0053 450 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
Lal25g0053 450 Gene3D - 23 79 - -
Lal25g0053 450 MobiDBLite consensus disorder prediction 383 404 - -
Lal25g0053 450 Gene3D - 81 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0053 Lal-Chr25 395093 398336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0053 12 143 MYB Transcription Factor Family AT5G06100 68.310 6.68e-63 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal25g0053 Myb_DNA-binding 3.2e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0053 25 395093 398336 Lal10g1298 10 19008732 19010515 LSH