Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0039 ATGGAACCTCCTCCTGTTTGTTCTATTGATTCTTTGTGTGCCAATCAAATCTCTTCTCTTCTCTCTCCACCCTCTTCTATTCTACTTGATGAATATTATCATACCCTTTTGTTTTCAACCCACTCCACTGCCATCAATGTTCAACAAGATCCAAACTTTGGAAAGGGTGTATATGCTGCTATGGCCTTCAAAGAAGGAGACCTTGTTCTCAAGGACCGCATCTTTGTGGGGGTTCAACACTATCATAACAAGATTGATTGCTTTGTCTGTAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAACTTCAAATTGGGAGGAGGCTTTACTTGCAAGAATTAAATGCTTCTGAGAATCACGGTTGTAATGAAATGGAAATTGACTCCTCTGATGAAGAAGAGAGTACTCAGCAATGTGGTTCTGGCAGTTCCAGCAAAACTAAAATTCCTCTACCTGAAGGTGTTGTGGAATCATTAATGAATGGCCAATTGATATTGCCTTACTCTAAGGAGTTCCCTTTGCCGTCACCTGTTCCATGCCATGGTGGATGTGGAGAAGCTTACTATTGCAGTGCGTCATGTGCTGAGGCTGATTGGGAATCCTCTCATTCATTACTCTGTACGGGCGAGAGGTCTGATCCGGCACGTAGAGAGGCACTTCTTAAATTTGTCAAACATGCTAATGAAACAAATGATATATTCTTACTTGCTGCAAAGGCTATTTCTACTACCATATTAAGGTACCGCAAGTTAAAAGCAAATAATTTTGAAGAGCAAGTGAAATGTAATAAATCTTGTGTTTCAAACAACCATGATTTCTCTCTTCTTTTGGAAGCTTGGAGGCCTATATCAATGGGATACAAGAGAAGGTGGTGGGACTGCGTTGCATTGCCAGAAGATATTGATTCTTCGGATGAAGCTTCATTCAGGATGCAAATAAAAGAACTGGCATTCAAGTCTCTTCAACTTCTGAAGACAGCTATATTTGACAAGGAGTGTGAGCCATTGTTCTCCCTTGAAATCTTTGGACATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGACACATCCAAATAAGGAAGAAGCTGAGAAAATTACACAACCTATTCTGGATGCTCTGGGTGAAGACTATTCTATTTGTTGCCAAGGAACTGCATTTTTTCCTTTGCAAAGCTGCATGAACCATTCTTGTTGTCCTAATGCTAAAGCTTTCAAAAGAGACGAGGATAGAGATGGCCAAGCAACAATAATTGCACTGAGGTCAATTTGTAAAGGAGAAGAGATAACAATATCATATGTTGACGAGGACCTTTCATATGATGAGAGACAAGCATCCCTTGCAGATTATGGTTTTAGATGCAGGTGCCCAAAGTGCATCGAAGAAGAGTCATAA 1443 0.3999 MEPPPVCSIDSLCANQISSLLSPPSSILLDEYYHTLLFSTHSTAINVQQDPNFGKGVYAAMAFKEGDLVLKDRIFVGVQHYHNKIDCFVCSFCFRFIGSIELQIGRRLYLQELNASENHGCNEMEIDSSDEEESTQQCGSGSSSKTKIPLPEGVVESLMNGQLILPYSKEFPLPSPVPCHGGCGEAYYCSASCAEADWESSHSLLCTGERSDPARREALLKFVKHANETNDIFLLAAKAISTTILRYRKLKANNFEEQVKCNKSCVSNNHDFSLLLEAWRPISMGYKRRWWDCVALPEDIDSSDEASFRMQIKELAFKSLQLLKTAIFDKECEPLFSLEIFGHIIGMFELNNLDLVVASPVEDYFLYIDDLTHPNKEEAEKITQPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKRDEDRDGQATIIALRSICKGEEITISYVDEDLSYDERQASLADYGFRCRCPKCIEEES 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0039 480 MobiDBLite consensus disorder prediction 133 147 - -
Lal25g0039 480 Pfam MYND finger 177 206 IPR002893 -
Lal25g0039 480 SUPERFAMILY SET domain 44 473 IPR046341 -
Lal25g0039 480 Pfam SET domain 54 449 IPR001214 GO:0005515
Lal25g0039 480 Gene3D SET domain 370 480 IPR046341 -
Lal25g0039 480 MobiDBLite consensus disorder prediction 126 147 - -
Lal25g0039 480 Gene3D - 122 211 - -
Lal25g0039 480 CDD SET_SMYD 389 475 - -
Lal25g0039 480 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 16 479 IPR044237 GO:0008168
Lal25g0039 480 ProSiteProfiles SET domain profile. 257 450 IPR001214 GO:0005515
Lal25g0039 480 SUPERFAMILY HIT/MYND zinc finger-like 177 207 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal25g0039 SET 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0039 - - aip:107613919 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0039 25 270783 276718 Lal25g0039 25 270783 276718 ECH