Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0030 ATGAGTAAGCTTTCAAGTGATGCTGTCAGAGAAGCTGTATCTGGAATCGTGACTGATTCCAAGGAGAAGAACCGTAAGTTTGTCGAGACTATTGAACTTCAAATCGGTCTCAAAAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTTAAGTTGCCCCACATCCCTCGCCCAAAGATGAAGATTTGTATGCTTGGTGATGCTCAACACGTTGAAGAGGCAGAGAAGATAGGATTGGATTATATGGATGTTGAAGCCTTGAAGAAGCTCAACAAAAACAAGAAGTTGGTGAAAAAGCTAGCTAAAAAATACCATGCCTTTTTAGCCTCTGAAGCAATCATTAAGCAGATTCCTCGTCTCTTGGGTCCTGGAAAGTTCCCTACACTTGTTACTCACCAAGAATCTCTGGAGTCAAAAGTCAATGAGACAAAGGCTATGGTCAAATTTCAGCTGAAGAAGGTGCTCTGCATGGGAGTAGCCGTTGGTAATGTTAGCATGGAGGAGAAGCAAATCTTCCAGAATGTGCAACTCAGTGTTAACTTCCTCGTATCCTTGTTGAAAAAAAACTGGCAGAATGTAAGGTGCTTGTATTTGAAGAGTACCATGGGGAAATCCTACCGTGTCTTCTAA 636 0.4198 MSKLSSDAVREAVSGIVTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0030 211 CDD Ribosomal_L1 9 210 IPR028364 -
Lal25g0030 211 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 209 - -
Lal25g0030 211 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 2 209 - -
Lal25g0030 211 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 211 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Lal25g0030 211 Gene3D - 131 209 - -
Lal25g0030 211 Gene3D - 1 119 - -
Lal25g0030 211 SUPERFAMILY Ribosomal protein L1 3 211 IPR023674 -
Lal25g0030 211 Pfam Ribosomal protein L1p/L10e family 22 205 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0030 Lal-Chr25 224354 226953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0030 1 211 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 85.648 5.13e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0030 K02865 - gmx:100305550 383.259