Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0027 ATGGTAGTTAATTCTGAGAATAAAGCTTTTGCTTATGACAACCTTTCCCAGGAATTTGCAGCTTCATCATCAACCATGACTCTACAACAACCACAGCAAGTGGTGCCATTGCAAGAATTGCCAGAATTTACATTTTCTTCACTCACCAAACAAAACTCAATACTCTCACTCACCCTTGATGAATTCCAATGCAAGAGTGGAAAGAGCTTTGGGTCAATGAGCATGGATGAGTTCCTAGCCAGCATTTGGAACTCTGATGATAATAACCAATTTTCACTACCTAATACCCATGATGCAGCTGGTACTACTTCTCAGAGTAAAAGTGTTGTTGCGACAGAACAAGTCATCATTCCTCACCAAGGCACATTCTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTATGGTGTGAAATACAACAACCGCGACATAACGAAGCTAATAACATTGGCAGGAATGATAGGACACTCAAAAGGCAAAGAACACTTGGGGAGATGACTTTGGAGGATTTCCTAGTAAAAGCTGGTGTAGTACAAGAACCATCGTCATTACCAAGAATCGCAATGCCATTTCAGAATCGACCATTGGGTGCAAGTTATGGATTTAGGCCTGAAATGGGGGTAGGATTTTGTACCCAACAAAATGTAGGAAGCCATGATGAGCTTGCAACATACCAAATGCTGTCACAGAATAATAGTTCGGTAGTAAGAGGTCAAAATACAAGCCGTGCTATAGAGAAATGCCGAGGTGTACCCGAGTCAAGTGGGAGTAATGGCAGGAAGAGGATAATCGACAGTCCTCCTGAACTGGCAGTGGAGCGAAGGCAGCGCAGAATGTTAAAGAATCGAGAATCAGCAGCACGATCTCGAGCAAGAAGACAGGTTTTTCGGTCATCATATATAATCTGTTCTGTTATACTTCAAATTGATCTAGTTATTAGTCATGCATATACTGTGGAGCTAGAAGCAGAACTGGGTATATTAAAACAAGAGAATGACAAGCTAAAAGAAATTCTGAGTGAAGCTGAGCGCAAGAGAAAACAGGAGATTTTTCACAGAAAGCAATCAACACAGGCTCAAAAGAGGACAGAAAAAATGAGGGCAATAAGAAGAAGTGTCAGCACAGCCTGGTGA 1140 0.4175 MVVNSENKAFAYDNLSQEFAASSSTMTLQQPQQVVPLQELPEFTFSSLTKQNSILSLTLDEFQCKSGKSFGSMSMDEFLASIWNSDDNNQFSLPNTHDAAGTTSQSKSVVATEQVIIPHQGTFSVPPPICKKTVDEVWCEIQQPRHNEANNIGRNDRTLKRQRTLGEMTLEDFLVKAGVVQEPSSLPRIAMPFQNRPLGASYGFRPEMGVGFCTQQNVGSHDELATYQMLSQNNSSVVRGQNTSRAIEKCRGVPESSGSNGRKRIIDSPPELAVERRQRRMLKNRESAARSRARRQVFRSSYIICSVILQIDLVISHAYTVELEAELGILKQENDKLKEILSEAERKRKQEIFHRKQSTQAQKRTEKMRAIRRSVSTAW 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0027 379 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 317 379 IPR043452 GO:0003700|GO:0045893
Lal25g0027 379 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 298 IPR043452 GO:0003700|GO:0045893
Lal25g0027 379 CDD bZIP_plant_BZIP46 276 343 - -
Lal25g0027 379 PANTHER BZIP TRANSCRIPTION FACTOR 317 379 - -
Lal25g0027 379 PANTHER BZIP TRANSCRIPTION FACTOR 27 298 - -
Lal25g0027 379 Coils Coil 320 350 - -
Lal25g0027 379 SMART brlzneu 272 343 IPR004827 GO:0003700|GO:0006355
Lal25g0027 379 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 279 294 IPR004827 GO:0003700|GO:0006355
Lal25g0027 379 Gene3D - 274 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0027 Lal-Chr25 213858 215615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0027 48 379 bZIP Transcription Factor Family AT3G44460 43.953 1.36e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0027 K14432 - gmx:100799576 376.326