Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0023 ATGGTTACCAATACTAGCAGTGACGAAGAAAACAACAACAACAACAACAGGAACATCATATTCAACAAATATGAGATCGGAAAGGTGTTAGGACAAGGTAACTTTGCAAAAGTTTATCACGGTAGAAACCTGGCGACAAATGAAAACGTGGCGATAAAAGTGATAAAGAAAGACAGGCTGAAGAAAGAGAGTTTAGTGAAACAAATAAAAAGAGAGGTATCAGTGATGCATCTGGTTCGCCATCCTAACATCGTGCAATTAAAAGAAGTGATGGCCACAAAAGCAAAGATCTTCATGGTTGTTGAATACGTCAAAGGAGGCGAACTATTCGCCAAGGTAACAAAGGGTAAAATGGATGAAGATGAAGCACGAAAGTACTTTCAACAATTGATCAGCGCCGTCGACTTTTGCCATAGCCGCGGCGTCACACACCGTGATCTCAAGCCTGAAAACTTGCTCCTCGATGAAAACCAAGATCTTAAGGTTTCCGACTTTGGGCTTTCTGCACTGCCGGAGCAGCGCCGCTCCGACGGGATGCTCGTCACGCCATGTGGTACACCTGCTTACGTGGCACCTGAGGTTTTGAAGAAGAAAGGGTATGATGGATCTAAAGCTGATATATGGTCTTGTGGTGTTATACTCTATGCATTGCTTTCAGGATATCTGCCATTCCAAGGTGAAAATGTTTTAAGGATTTATAGAAAATCTTTCAAAGCTGATTATGCATTTCCTGAATGGATTTCACCTCAGGCTAAGAATCTTATATCCAAATTGCTTGTTGTTAATCCTGAGAAGAGGTATTCAATTGATGATATAACCAAGCATCCATGGTTTCAAGTTGGGTTCATGAGACCCATTGCTTTTTCATTAACGAAGGAGAATTCTGTTCAACACAACATTGATTTCAACTATGATACTGATGTTGAAGATGTTAATATCGGAGGAAAGCCTGCTCGCCCATTTTACAATGCATTTGAGATAATATCGTCATTGTCTCATGGGTTTGATCTTAGGAGCTTGTTTGAGACGAGGAAGAGATCACCGTCAATGTTTATTTCAAAGTTCTCGGCTTCAGAAGTGGTGGCGAAACTGGAGGGTGTGGCGGAGAAGCTGAATTTTAGGATAACGGGGAAGAAGGAGTATACGGTGAGGATGCAGGGGGAGAAGGAGGGGAGGAAGGGGAAGCTGGGGATGACGGTGGAGGTGTTTGAGTTGGCACCAGAGGTGGCGGTGGTGGAGTTTACTAAGTCTGCAGGGGATACATTAGAGTACATTAAGTTTTGTGAGGACCAAGTTAGGCCTTCACTCAAAGACATTGTTTGGTCATGGCAGGGTCAGAGTAATTGCCAATAA 1353 0.4294 MVTNTSSDEENNNNNNRNIIFNKYEIGKVLGQGNFAKVYHGRNLATNENVAIKVIKKDRLKKESLVKQIKREVSVMHLVRHPNIVQLKEVMATKAKIFMVVEYVKGGELFAKVTKGKMDEDEARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENQDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVLRIYRKSFKADYAFPEWISPQAKNLISKLLVVNPEKRYSIDDITKHPWFQVGFMRPIAFSLTKENSVQHNIDFNYDTDVEDVNIGGKPARPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFISKFSASEVVAKLEGVAEKLNFRITGKKEYTVRMQGEKEGRKGKLGMTVEVFELAPEVAVVEFTKSAGDTLEYIKFCEDQVRPSLKDIVWSWQGQSNCQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0023 450 Gene3D Kinase associated domain 1, KA1 318 442 - -
Lal25g0023 450 ProSitePatterns Protein kinases ATP-binding region signature. 30 57 IPR017441 GO:0005524
Lal25g0023 450 PANTHER CBL-INTERACTING PROTEIN KINASE 16 15 449 - -
Lal25g0023 450 Pfam Protein kinase domain 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0023 450 CDD CIPK_C 323 437 - -
Lal25g0023 450 Pfam NAF domain 321 376 IPR004041 GO:0007165
Lal25g0023 450 PANTHER - 15 449 - -
Lal25g0023 450 SUPERFAMILY Protein kinase-like (PK-like) 20 279 IPR011009 -
Lal25g0023 450 ProSiteProfiles NAF domain profile. 317 342 IPR018451 GO:0007165
Lal25g0023 450 SMART serkin_6 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0023 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Lal25g0023 450 ProSiteProfiles Protein kinase domain profile. 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0023 450 Gene3D Transferase(Phosphotransferase) domain 1 14 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0023 Lal-Chr25 189800 191152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0023 17 448 CBL-interacting serine-threonine protein kinases AT5G10930 60.599 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal25g0023 Pkinase 7.4e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0023 - - gmx:100804244 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0023 25 189800 191152 Lal25g0023 25 189800 191152 ECH