Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0022 ATGGAATTTTCATCATGGATTAACACTTCATTGGATCTCAACATTAACCCTCCTAGAGTTTATGAAGAAGTTATCAAAAAGGAGGTGGAAACCAATTTGTTCTCATTGAGTATGGGAATGTCTTCTACCAAAGAAGAGTGTTCTAGTGCCTTGGTGGAGGAGCTGAAGAGGGTGAGTGCAGAAAACAAAAAGTTGAGTGAAATGCTTACAGATATGTGTGATAGCTACAATACTTTGAGAAGCAACTTGGTAGATTATATGACAAAGAATTCTGATAAGGATCATCAGCTCAACTTATCTTTCAAGAAAAGAAAGCCTGAAAGCAGTAACAACAACAATAGTAATCCAATGGTTGTTAATAATGGTAACTCTCAGAGCAGTTCAACTGATGAGGAATCATGCAAGAAACAAAGGGAAGATACCATCAAGTCCAAAATTTCTACAGTTTATGTCAGAACAGAAGGATCTGATACAAGCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGACAAAAAGTGACTAGGGATAACCCTTCTCCAAGAGCATATTTCAAATGTTCCTTTGCTCCAAGCTGCCCAGTCAAAAAGAAGGTACAAAGAAGTGTGGAAGATCAATCCATTCTAGTTGCAACTTATGAAGGAGAGCACAATCATCCTCACTCTTCTCAAATGGAGGCAACATCAGGCTCCAGCCGCTGCATGACCCTAAATCCGGCATCGCTTAACTCTTCTGCACCAACAGACACACTTGAGCTCACAAAGTCTAAGTCCAACAATGGGTCTAAGAATGTAAATCCCAAAATTGTTACACCGAAAGTTCCGCAGACTTTGGTAGAACAAATGGCTAATTCCTTGACCAAGGATCCTAACTTCAGAGCAGCACTCATTGCTGCCATTTCAGGAAGAGCATTGCACAAGAATTAA 930 0.3968 MEFSSWINTSLDLNINPPRVYEEVIKKEVETNLFSLSMGMSSTKEECSSALVEELKRVSAENKKLSEMLTDMCDSYNTLRSNLVDYMTKNSDKDHQLNLSFKKRKPESSNNNNSNPMVVNNGNSQSSSTDEESCKKQREDTIKSKISTVYVRTEGSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYEGEHNHPHSSQMEATSGSSRCMTLNPASLNSSAPTDTLELTKSKSNNGSKNVNPKIVTPKVPQTLVEQMANSLTKDPNFRAALIAAISGRALHKN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0022 309 Pfam WRKY DNA -binding domain 163 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g0022 309 Gene3D WRKY domain 143 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal25g0022 309 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 309 IPR044810 GO:0003700
Lal25g0022 309 PANTHER TRANSCRIPTION FACTOR 1 309 - -
Lal25g0022 309 MobiDBLite consensus disorder prediction 103 130 - -
Lal25g0022 309 MobiDBLite consensus disorder prediction 241 270 - -
Lal25g0022 309 MobiDBLite consensus disorder prediction 101 139 - -
Lal25g0022 309 SUPERFAMILY WRKY DNA-binding domain 159 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal25g0022 309 SMART WRKY_cls 162 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g0022 309 ProSiteProfiles WRKY domain profile. 157 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0022 Lal-Chr25 172301 174440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0022 4 309 WRKY Transcription Factor Family AT1G80840 51.250 4.43e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal25g0022 WRKY 2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0022 - - gmx:100798375 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0022 25 172301 174440 Lal25g0022 25 172301 174440 ECH