Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0018 ATGTTTGACTGTGCTGGTGCTTACAGGAAGGAGAATTTTACAAGGTTGGATGATCAGGAATCTAATGCGTCAATGTCATCTGGCACAAGTGGAATGATGAGATTAAGGTATACGGGGCGTGGGAAAAAGAATTCATCAAAATCATTTCGGGTAGGAGTGAAGAAAGGATCGGATGGACTAAGGAGGATATTTGGAAGATCACTCAAAAGTGGAGTGGCGTGGTCAGTGTTCCCAGAAGATCTTAAAGTGTCTGAGAGAAAAGTATTTGACCCTCAAGATAAGAACCTTTTGTATTGGAATAAGTTTTTACAGATTCTATGCATTCTTTCTATATCTTGTGACCCTCTCTTCTTTTATCTTCCTTATTTCAATCACAAATCATTTTGCCTCGCCATAGATAGTTCCCTAGCAAATTCTGTAATTACCATGAGAACAATTTTCGATTGTTTTTATCTCCTTCGCATAAGTTTTCAATTCCGCACAGCTTTCATTGCGCCTTCCTCTCGTGTATTTGGACGAGGTGAACTTGTCATTGATCCTGCAGAGATTGCCAAGAGATATTTACAACGTTACTTCATGGTTGACTTCATTTCTGTCTTACCTCTCCCACAGCTTATTGTGTGGAAATATCTTCGTAGAACAAGACATACAGAGGTATTGGCCACAAAAACGGCGTTGTTGAGAGTTGTCATCCTCCAATATTTTCCAAGATTTGCACGCTTTATACCTTTAGCTTCAGAGGTTAACAAGACAGCAGGTGTTTTTTCTGAAAATGCACTGGTCGGTGCCTCATACTATTTGATCTGGTATATGCTTGGTAGTCATATAACTGGGTCTGTGTGGTACTTACTGGCTATAGAACGTAATGACAGATGCTGGAGGGATGCTTGTAAGGGAGTTGAAATATGTCAGACACAATTCTTGTACTGTGGGAGTTCAAATAAGCGTGTTCCTAACTACGATGAGTGGAGAAATATCAGCATGAGTGTTCTTAAGACTAACTGTTTTATTGGGGATGATAACTCGCCATTTAATTATGGAATCTTCAGTCAAGCCATAGAATCTAATATTGTTGCATCCATTGATTTCTTTCCTAAACTTTGTTACTGTTTGTGGTGGGGGCTCCAAAACTTAAGTACAGTTGGTCAGGGGCTTCAAACCAGTACCTACCCTGGAGAAGTTCTGTTTTCCATTGTAATTGCTATTTTGGGGCTTGTCCTTTTCGCTCTACTCATTGGAAAGATGCAGACCTACCTCCAATCAATGTCGGTTCGTCTTGAGGAAATGAGGATCCAAAGACGTGACTCTGAGCAGTGGATGCATCATAGGTTGCTTCCTTCTGAGCTAAGGGAAAGAGTTAGACGGTATGAACAATACAAATGGCTCAACACTCGAGGAGTAGATGAAGATAATTTGGTTAGGAGTCTTCCAAAAGATCTTAGGAGGGATATCAAACGGCACCTTTGTTTGAATTTAGTCAGAAGGGTTCCTCTGTTTGCTAACATGGATGAAAGGTTGGTTGATGCTATATGTGAGCGATTGAAACCATGCTTATACACAGAGAAGACGTACGTAGTTCGGGAAGGGGATCCAGTTAATGAGATGTTGTTCATAATTCGAGGGCGTCTAGAGAGTATCACAACAGATGGTGGAAGAAGTGGATTTTTCAACAGAGGATTTCTGAAAGAAGGTGACTTTTGTGGAGAAGAGCTACTAACATGGGCATTGGATCCAAATTCTGCAGGTAACTTGCCATCATCTACAAGGACAGTGAAGGCCTTAAATTTGGTAGAAGCGTTTGCTTTGGAAGCAGAAGAGTTGAAGTTTGTTGCTTCTCAGTTTAGGCACCTTCATAGCAGGCAGGTTCAGCATACCTTCCGTTTCTATTCACAGCAATGGAGAACATGGGCTTCTATGTTCATCCAAACTGCATGGAGGCGTTATTCAAGGAGGAAGATTATCGACAAGCGCAGAAAGGATGAAGCACAAGAGTTTTATGAATCTGATTATTATGAACAAGATAATGATGATGTTTCAAGAGCCTTGGTTCCACTTCCACGTATTCATACAACTTCTTCAACTACTTGTTCAACTTCAGGCAGGACTAGGCCTGGATTTGATACAACTATATATGCTACTCTCTTTGCTGCTAATGCCCTTCGTACACATAGGCTTCACACTTCAACTTCCAGGGGACTTCACAAACTCCCTAAGCCTCCAGAACCTGACTTTACTCATCTTGATGAATGA 2250 0.4102 MFDCAGAYRKENFTRLDDQESNASMSSGTSGMMRLRYTGRGKKNSSKSFRVGVKKGSDGLRRIFGRSLKSGVAWSVFPEDLKVSERKVFDPQDKNLLYWNKFLQILCILSISCDPLFFYLPYFNHKSFCLAIDSSLANSVITMRTIFDCFYLLRISFQFRTAFIAPSSRVFGRGELVIDPAEIAKRYLQRYFMVDFISVLPLPQLIVWKYLRRTRHTEVLATKTALLRVVILQYFPRFARFIPLASEVNKTAGVFSENALVGASYYLIWYMLGSHITGSVWYLLAIERNDRCWRDACKGVEICQTQFLYCGSSNKRVPNYDEWRNISMSVLKTNCFIGDDNSPFNYGIFSQAIESNIVASIDFFPKLCYCLWWGLQNLSTVGQGLQTSTYPGEVLFSIVIAILGLVLFALLIGKMQTYLQSMSVRLEEMRIQRRDSEQWMHHRLLPSELRERVRRYEQYKWLNTRGVDEDNLVRSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLVDAICERLKPCLYTEKTYVVREGDPVNEMLFIIRGRLESITTDGGRSGFFNRGFLKEGDFCGEELLTWALDPNSAGNLPSSTRTVKALNLVEAFALEAEELKFVASQFRHLHSRQVQHTFRFYSQQWRTWASMFIQTAWRRYSRRKIIDKRRKDEAQEFYESDYYEQDNDDVSRALVPLPRIHTTSSTTCSTSGRTRPGFDTTIYATLFAANALRTHRLHTSTSRGLHKLPKPPEPDFTHLDE 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0018 749 ProSiteProfiles cAMP/cGMP binding motif profile. 498 581 IPR000595 -
Lal25g0018 749 Gene3D Jelly Rolls 496 616 IPR014710 -
Lal25g0018 749 SUPERFAMILY cAMP-binding domain-like 428 618 IPR018490 -
Lal25g0018 749 MobiDBLite consensus disorder prediction 726 749 - -
Lal25g0018 749 SUPERFAMILY Voltage-gated potassium channels 91 420 - -
Lal25g0018 749 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 27 747 - -
Lal25g0018 749 CDD CAP_ED 498 629 IPR000595 -
Lal25g0018 749 SMART cnmp_10 498 629 IPR000595 -
Lal25g0018 749 Gene3D - 102 423 - -
Lal25g0018 749 Pfam Cyclic nucleotide-binding domain 519 608 IPR000595 -
Lal25g0018 749 Gene3D Helix hairpin bin 425 489 - -
Lal25g0018 749 Pfam Ion transport protein 98 425 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lal25g0018 749 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 27 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0018 Lal-Chr25 150581 161307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0018 9 744 Ion Channels AT1G15990 65.559 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0018 K05391 - gmx:100810453 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0018 25 150581 161307 Lal25g0018 25 150581 161307 ECH