Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0017 ATGCCTTCAAGACCCTTCTCTTTTAGTCCAAAACCTTCACCTCCAAGTTTTTTCACCAAAACAAGTGTCCTGTTCCTTGCACTCACTATTTCAGCTTCTGTTGTGATCTTCTGCTCAATCCTTTACTTCCTTTACCATATTTGGAACTCTCTTGTACATAGAGCTAAGACTATTCCCTTTGATGCTAGTGCTCCCTTGAAGCTTCAAAGATTCTCATACAAAGACTTAAAGCAAGCCACCAATGGCTTTGACATTTCCAATGTCATTGGTAAAGGTGGTTCCGGCACTGTTTTTAGAGGAATACTCAAAGATGGGAAATTGATTGCCATCAAGAGACTAGACTCTCTGTCTTTGCAGTCAGAAAGAGAGTTTCAGAATGAGCTTCAAACTCTTGGAGGGTTAAGATCACCATTCTTGGTGACCCTTTTGGGGTATTCTGTTGAAAAAAGCAAAAGAGTGTTGGTGTATGAATATATGCCTAACAGAAGCTTGCAAGAGTCACTATTTGGAGAAGGGTGTGTGAGTTTGAGTTGGGAGAGGAGGTTTTGCATTATATTGGATATTGCCAGAGCATTGGAGTTCTTGCACCTTGGATGTGATCCACCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTTCTTGATGCTGAGTGCCGCGGGAAGATCTCCGATTTCGGGTTGTCAAGGATTAAAGTGGAGGGTGAATTTGGAATGGACTTGTTCAGCCAGGACTTAGGCAAGAGCCAAGACCTTTCAGGTAATCTAACTGCAGAAACTCAAACCCCTCCAGTTATTGGTACTCCAGTTGAGAGTGTTAATGAAGTGGATTTTGCTCTAGCTTTGCAAGCTTCTTCTTCATCCAAGAACAGCAGAACTTGTTTTAATGTTAGAGCATTGAACTTGAATTCTATGAATTACAATGCCAATATTATTGCCAGTGAGAGTGAAATAAGGAGTGTGAATAGTAATAATGCAAAGGGTAAGGAAATTTCAACTTTAGATATAGGAGGGGATGATTGTTGGAATAGCAAGTTTGTTCCATATGATGATGAGTTTTCTAGCATTGATTATAGTAAGGAGTTAAGTCCTAATGCTTCTTTGGTGGATGATGAGAAGGAAAATGGAAAACAATGGGGAAAAGATTGGTGGTGGAGACAAGATGGAAGTGGTGAATTATGTAGTAAAGACTATGTTAAGGAGTGGATAGGGAGTCAGATTTGTGCATCAAAGCCTACCTGGGATGATGGAAAGAAGAATATTCATGAGAAAGTAGTAGAGTTGGAGAATTCAGATCCAACAATAGATAAAGCCAATGATGCAAATGGATCTCAATTACAATTGTTTGATAATGTGGTTGATAAGAAAGAGTTGAAGGGAAAGAAGAATCAAAAGAATAAGCAGAGGAAGATGCAAGAGTGGTGGAAAGAAGAGCATGTTGCTGAATTAAGTAAGAAGGGAAGAAAACTAAAAACTTTTCAAAGTAAGTGGAAGAAAGGTTTGAAAGTGCCTCATTTTGACTTAGGTAGAAGGTTCTACATTTCCAAGAGGAAGAAGAACTTTGGAGGAGAGAAGGATTTAGAGAATGAGTGTGATCAAAATGGTGGTGAGTTTAGCTTCAGAAGAGGTTGGAGGAAGAAGAAGAGTACTCATTCGGTTGGAAGCGACATCGATCTTTTCAGCCACGAGCTTAGCAGCACAACTAGCATGAGAGGGACATTGTGTTATGTAGCACCAGAATATGGAGGGTGTGGATTCTTAATGGAGAAGGCTGATATATACAGTTTTGGAGTATTGATTCTTGTGATTGTGTCTGGTAGAAGACCATTACATGTTCTTGCATCTCCAATGAAGCTAGAGAAAGCTAATTTAATAAGCTGGTCTAGGCACTTGGCTCATGTTGGTAACATTTTAGAACTAGTAGATGAGAGATTGAAATATGATTATAACAAGGAACAAGCAAGCATGTGCATCAACTTGGCACTCACTTGCTTACAGAAAATCCCAGAATTGAGGCCAGATATTGGAGTTATTGTTAAAATTTTGAAGGGTGAGATGGACCTTCCATCATTTCCATTTCAGTTCTCACCTTCTCCTCCTCCTTCCAAATTATACACCAGATCAAGGAGAAAACAAAAGGGCAGTGTAGAATAA 2154 0.3955 MPSRPFSFSPKPSPPSFFTKTSVLFLALTISASVVIFCSILYFLYHIWNSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDISNVIGKGGSGTVFRGILKDGKLIAIKRLDSLSLQSEREFQNELQTLGGLRSPFLVTLLGYSVEKSKRVLVYEYMPNRSLQESLFGEGCVSLSWERRFCIILDIARALEFLHLGCDPPVIHGDIKPSNVLLDAECRGKISDFGLSRIKVEGEFGMDLFSQDLGKSQDLSGNLTAETQTPPVIGTPVESVNEVDFALALQASSSSKNSRTCFNVRALNLNSMNYNANIIASESEIRSVNSNNAKGKEISTLDIGGDDCWNSKFVPYDDEFSSIDYSKELSPNASLVDDEKENGKQWGKDWWWRQDGSGELCSKDYVKEWIGSQICASKPTWDDGKKNIHEKVVELENSDPTIDKANDANGSQLQLFDNVVDKKELKGKKNQKNKQRKMQEWWKEEHVAELSKKGRKLKTFQSKWKKGLKVPHFDLGRRFYISKRKKNFGGEKDLENECDQNGGEFSFRRGWRKKKSTHSVGSDIDLFSHELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWSRHLAHVGNILELVDERLKYDYNKEQASMCINLALTCLQKIPELRPDIGVIVKILKGEMDLPSFPFQFSPSPPPSKLYTRSRRKQKGSVE 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0017 717 Gene3D Transferase(Phosphotransferase) domain 1 159 269 - -
Lal25g0017 717 Gene3D Transferase(Phosphotransferase) domain 1 537 688 - -
Lal25g0017 717 PANTHER OS07G0586332 PROTEIN 1 714 IPR044576 -
Lal25g0017 717 PANTHER OS08G0275200 PROTEIN 1 714 - -
Lal25g0017 717 SMART serkin_6 83 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0017 717 Gene3D Phosphorylase Kinase; domain 1 50 158 - -
Lal25g0017 717 ProSiteProfiles Protein kinase domain profile. 83 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0017 717 Pfam Protein kinase domain 85 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0017 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Lal25g0017 717 MobiDBLite consensus disorder prediction 693 717 - -
Lal25g0017 717 SUPERFAMILY Protein kinase-like (PK-like) 63 704 IPR011009 -
Lal25g0017 717 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0017 Lal-Chr25 145982 148135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0017 567 682 Receptor kinase-like Gene Family AT3G58690 30.769 1.46e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lal25g0017 Pkinase 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0017 - - ccaj:109812677 1110.13