Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0016 ATGTTGAACATTAGTGTGTGGGTGATGTTGGTTGTGATGGTATATGGAGTTGGAGGAACAGACCACATAGTAGGTGCTAATCATGGGTGGAATCCTGGTATCAACTACACTCTTTGGTCCAACAATCACACTTTCTATGTCGGTGACCTTATCTCATTTAGGTACCAGAAGAATGAATACAATGTGTTTGAGGTGAACCAAAGTGGATATGAGAATTGTAGCACAGAAGGGGCTGTTGGGAATTGGAGTAAAGGGAAGGACTTCATACCCTTGAATATGGCCAAGAGATATTACTTCATTTGTGGCAATGGCCAATGCTTCAATGGCATGAAGGTTTCTGTCCTTGTCCATCCTCTCCTTTCTCCTCAATCTTCTGCCAACCATTCTTCTCATATATCTCATGCTCCACTCCCCTTCCAATCACAGCTTCACACTCTAATATTCTCTTCTGCTCTATTCTGCTTTGCTTGGAATTGGATCTAG 483 0.4244 MLNISVWVMLVVMVYGVGGTDHIVGANHGWNPGINYTLWSNNHTFYVGDLISFRYQKNEYNVFEVNQSGYENCSTEGAVGNWSKGKDFIPLNMAKRYYFICGNGQCFNGMKVSVLVHPLLSPQSSANHSSHISHAPLPFQSQLHTLIFSSALFCFAWNWI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0016 160 ProSiteProfiles Phytocyanin domain profile. 20 118 IPR003245 GO:0009055
Lal25g0016 160 PANTHER OS09G0557900 PROTEIN 8 127 - -
Lal25g0016 160 Gene3D - 19 120 IPR008972 -
Lal25g0016 160 SUPERFAMILY Cupredoxins 19 117 IPR008972 -
Lal25g0016 160 Pfam Plastocyanin-like domain 30 110 IPR003245 GO:0009055
Lal25g0016 160 PANTHER BLUE COPPER PROTEIN 8 127 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0016 Lal-Chr25 143597 145168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0016 1 159 Phytocyanin Superfamily AT5G15350 34.524 2.38e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0016 - - pvu:PHAVU_010G162400g 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0016 25 143597 145168 Lal25g0016 25 143597 145168 ECH