Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0015 ATGGCAGATCTCAAAGAGCGGCTACTACCACCAAAACCTGCATCAGCTCTTAACTTAAGAGAACCTGCAAATCGACCATCTGCCTCTGGAAGGCAACCTTTTCAAGGAGTTGATGTTCTAGGGCTAAAGAAACGTGGCCAAGGCCTTCGATCATGGATTCGTGTTGATACATCTGGAAACTCACAGGCCATTGAGGTAGACAAGTTTACTATGATGCGACGCTGTGATCTACCTGCACGTGACCTTCGTCTACTTGATCCTTTGTTTGTCTACCCGTCAACCATCCTAGGTAGAGAAAAGGCAATTGTAGTAAATCTAGAGCAGATACGGTGTATTATTACAGCAGACGAGGTTCTTCTCTTGAATTCCCTTGATAATTATGTATTGCACTATGTGATGGAGCTGCAACGACGGTTGACAACAACTGGCGTAGGCGAGGTCTGGCAGACAGATAGTTCAGACATGAGCCGAAGGAGAGGAAGTAGGAGTTTTGAAAATGCATTTAACAACACTTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCCTCGAGGCAGCATGCACGTTTCTTGACTCCCAGGCTGCAGAGTTAGAAATTGAGGCTTATCCGTTGTTGGATGAACTGACATCAAAGATCAGTACTCTCAATTTGGAACGTGTTCGTCGGTTGAAAAGCAGACTTGTAGCCCTGACCAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAACTTATGGATGATGATGGTGATATGGCTGAAATGTATCTTACGGAGAAGAAAAGACGGATGGAGTTGTCATTTAACGGAGATCAGTCTTTTGCTGGATATAGATCAGTTGATGGTGCATCCATTTCTGCTCCAGTTTCTCCTGTTGCATCACCTCCTGAATTTCGGAGGCTTGAAAAGACGTTGAGCATTGCGAGGAGTCGACATGAAAGCATGAGGAGTATTGATAGTGCTACAGAAAATATAGAGGAGCTTGAGATGTTGCTAGAAGCATACTTTGTTGTCATTGACAGCACGCTAAACAAGTTGACATCGTTGAAAGAGTACATCGATGACACCGAAGATTTCATTAACATTCAACTGGATAATGTGCGTAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACAGCAACATTTGTTGTTGCCATCTTTGGTGTGGTAGCAGGAGTATTTGGGATGAATTTTGAAATTCCATTATTTAATGAACCCTATGCATTCAACTGGGTCCTTATAATAACAGGAATTACTGGAGTCTTCATATTTAGTGCATTTGTGTGGTTCTTCAAATACAGAAGACTCATGCCCCTGTAG 1332 0.4294 MADLKERLLPPKPASALNLREPANRPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDNYVLHYVMELQRRLTTTGVGEVWQTDSSDMSRRRGSRSFENAFNNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFNGDQSFAGYRSVDGASISAPVSPVASPPEFRRLEKTLSIARSRHESMRSIDSATENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPLFNEPYAFNWVLIITGITGVFIFSAFVWFFKYRRLMPL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0015 443 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 443 - -
Lal25g0015 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 433 IPR045863 -
Lal25g0015 443 Pfam CorA-like Mg2+ transporter protein 333 431 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lal25g0015 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Lal25g0015 443 Gene3D - 40 123 - -
Lal25g0015 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Lal25g0015 443 Coils Coil 224 251 - -
Lal25g0015 443 MobiDBLite consensus disorder prediction 1 34 - -
Lal25g0015 443 Gene3D Magnesium transport protein CorA, transmembrane region 130 374 - -
Lal25g0015 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 443 IPR039204 -
Lal25g0015 443 Coils Coil 314 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0015 Lal-Chr25 138200 143163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0015 1 443 MRS2 Gene Family AT1G16010 86.036 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0015 K16075 - gmx:100779803 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0015 25 138200 143163 Lal25g0015 25 138200 143163 ECH