Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0006 ATGTGGCTTCAAAATAATAATAATAATCCAAAGGGAGGAAAAGGTAATGGATTGGTTGCAGTGGCTGTAGATAAAGATAAGAGAAGCCAATATGCTCTTAAATGGGCTGCTGATAGTCTTCTTTCAAGAGGACAAACTATTATTCTGATTCACGTTACCACTTCTTCATCCTCAACAGGTAGCAACGCCTTAGTTTGTAATATCAGCAGTTCAATTGCATCTCACCACAGAGATAATCAACTTGATAACTCTACCAACGATCTATTTCTTACCTTCCGTTGCTATTGTACACGCAAACATATACAATGCCTTGATGTCCTACTTGAAGACACTGATGTTGTCAAAGCAATAACAGAATATGTCTCTTATGCCGCTATTGACAACTTGGTGCTTGGTGCATCATCCAGACATGGATTCATTAGATTCAAGTCATCAAATACTGCTAGTAGCATAACAAAGGGGACACCGGATTTTTGTACTGTATATGTGATCTCAAAGGGAAAAATCTCCACAGTTAGGAGTGCTTCTCGTCCAGCCCCACATGCCTCACCACTGCTCAAACATATACAGAACCTAAATAAAGACAATGGAGGAAATCAACCTGAGATCATACCCTATAGACGTTCCAATTTCAGAGGTTCATTTGTTTATTTTCCACCACATAAATCAAATACTGGTGCAGAGAGAGATATGATATCAATTAAACCTCACAGCTGGCAGGATGAACCACTTGATCCAGCATTTGAAAGAAGAGGAGACATGATGAGTGCATTGTCTCGGGTGGATTTGGGAGAATCAGATACAGACATATCATTTGTAAGCTCTGACAGGCCAAGCAGTGGACGAACATCATCTGTTTATGACTTCATTCACTCTGCTCGAACTTCACCAGTTTCATCATTTGTAAGTTCTGATCATAGCTTTGGATCTTACCGTTTGGGATTTAAGTTCAATGACCCAATGTCATTGGATAGCACTGCTACGTCATTCTCAAATTCATCTCAGAACATGGATGAAGCAGTAGAAGCTGATATGAGAAGGTTGAAGCTCGAATTAAAGCAAACCATGGAAATGTACAGTACGGCATGCAGGGAAGCACTCAAGGCGCAACACAAGCTAATGGAACTGAACCACTGGAAAACGGAGGAAGAAATAAAGATAGAAGAGGCACGATTGGCGCTGGAAGCTGCGCTGGTAATGGCAGAGAAGGAGAAAGCAAAAAGTAAGGCAGCGTTGGAAACGGCAGAAGCACTTAAGCAAATTGCTGAGGTTGAATCACATAGAAGAGAAAGTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAATTGAGAAAGGTACTGGACAATGTAGCCCAAACTGATGTAAAGTATAGGAAATACACAATTGAGGAGATTGAAGAAGCCACCAACTTCTTTTCTGAATCTCAGAAAATTGGTGAAGGAGGTTATGGCCCTGTTTATAAATGTTACCTTGATCACACTCCAGCCGCTGTCAAGGTTCTACGACCAGATGCTGCTCAAGGAAAATCACAGTTTCAGCAAGAGATTAACATACTGAGCTGCATACGTCATCCCAATATGGTGCTTCTTCTAGGAGCATGTCCAGAGTATGGCATACTGATTTATGAATATATGTCTAATGGAAGCTTGGATGACTGTCTCTTTAGAAAAAAGAACAATGTTGCTTTGCCTTGGCAACTGAGGGTCCGAATTGCTGCAGAGATAGGGACTGGACTACTCTTCCTCCATCAGACAAAACCTGAACCATTAGTGCACCGTGATCTAAAACCAAGCAACATTTTGCTAGACCAGAACTATGTAAGTAAGATGAGTGATGTTGGATTGGCAAGGCTAGTCCCTGCTGTGGCTGAAAATGTAACACAATTGTGTATGACATCAGCAGCTGGAACTTTCTGTTACATTGATCCAGAGTATCAGCAAACAGGAATGCTTGGAGTCAAATCTGATGTGTATTCTCTTGGGATCATTTTTCTACAATTACTGACAGGAAGACCTCCAATGGGATTGGCTCACCATGTTCAACAGTCTATTGAGAAGGGCACATTTTCTGAAATGTTAGACCCATCTGTCACTGAATGGCCTTTTGAACAAGCATTGTGGCATGCAAAGATGGCAGTCAAATGTGCTGAACTCAGGCGAAAAGACCGGCCAGACCTTGGCAAAGAAATATTGCCTGAGCTCAATAAATTGAGAGAGTTTGCTGAAGAAAGGATGTGTCCCATCTTTTTAGGAGGACGACCTAGTTGTACTAGTAGTACTGCATCTTCCCCCAACAACAGTCAACCTTCCATACAGCAGGATGTGTCGAGCAACCCACACCATGATGTTGAACAATCAGGAAACTCAAGCCTATCGACGGCGACAAAAGAAAAGGATTAA 2400 0.4163 MWLQNNNNNPKGGKGNGLVAVAVDKDKRSQYALKWAADSLLSRGQTIILIHVTTSSSSTGSNALVCNISSSIASHHRDNQLDNSTNDLFLTFRCYCTRKHIQCLDVLLEDTDVVKAITEYVSYAAIDNLVLGASSRHGFIRFKSSNTASSITKGTPDFCTVYVISKGKISTVRSASRPAPHASPLLKHIQNLNKDNGGNQPEIIPYRRSNFRGSFVYFPPHKSNTGAERDMISIKPHSWQDEPLDPAFERRGDMMSALSRVDLGESDTDISFVSSDRPSSGRTSSVYDFIHSARTSPVSSFVSSDHSFGSYRLGFKFNDPMSLDSTATSFSNSSQNMDEAVEADMRRLKLELKQTMEMYSTACREALKAQHKLMELNHWKTEEEIKIEEARLALEAALVMAEKEKAKSKAALETAEALKQIAEVESHRRESVEVKALKEAEELRKVLDNVAQTDVKYRKYTIEEIEEATNFFSESQKIGEGGYGPVYKCYLDHTPAAVKVLRPDAAQGKSQFQQEINILSCIRHPNMVLLLGACPEYGILIYEYMSNGSLDDCLFRKKNNVALPWQLRVRIAAEIGTGLLFLHQTKPEPLVHRDLKPSNILLDQNYVSKMSDVGLARLVPAVAENVTQLCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHHVQQSIEKGTFSEMLDPSVTEWPFEQALWHAKMAVKCAELRRKDRPDLGKEILPELNKLREFAEERMCPIFLGGRPSCTSSTASSPNNSQPSIQQDVSSNPHHDVEQSGNSSLSTATKEKD 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0006 799 PANTHER BNAA05G18880D PROTEIN 14 782 - -
Lal25g0006 799 SUPERFAMILY Protein kinase-like (PK-like) 455 725 IPR011009 -
Lal25g0006 799 Pfam Universal stress protein family 19 153 IPR006016 -
Lal25g0006 799 Gene3D Transferase(Phosphotransferase) domain 1 545 746 - -
Lal25g0006 799 Gene3D HUPs 19 166 IPR014729 -
Lal25g0006 799 CDD STK_N 18 167 - -
Lal25g0006 799 Gene3D Phosphorylase Kinase; domain 1 449 544 - -
Lal25g0006 799 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 164 - -
Lal25g0006 799 Coils Coil 387 418 - -
Lal25g0006 799 MobiDBLite consensus disorder prediction 755 799 - -
Lal25g0006 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Lal25g0006 799 ProSiteProfiles Protein kinase domain profile. 472 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0006 799 MobiDBLite consensus disorder prediction 755 793 - -
Lal25g0006 799 Pfam Protein kinase domain 473 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0006 799 PANTHER OS02G0152300 PROTEIN 14 782 - -
Lal25g0006 799 SMART serkin_6 472 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0006 Lal-Chr25 70946 74937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0006 1 771 Receptor kinase-like Gene Family AT1G78940 55.796 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal25g0006 Pkinase 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0006 - - gmx:100801601 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0006 25 70946 74937 Lal1g1171 1 12982961 13004230 PCT
Lal1g1171 1 12982961 13004230 Lal25g0006 25 70946 74937 PCT