Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0005 ATGCCAATGGGCGCGCGCTCTGCTATGCTTGTGCGCGCACCACCAACATCCATTTATTCTCATCATAATGTTTACTTTTTTGTTTTGGTATTATTGCTATCAATACCATGTTCCTGTGAATATGTCTCTGATGGAGAGGCACTATTGAAGTTCAAGAATTCATTGAGGAATGTGGTATCCCTCAGCAGTTGGGATCCAACAATAAACCCAAAGCCACCTTGCTCTGGAAACGTCCCTAACTGGGTTGGATTGTTGTGTATGAATGACAGAGTTTGGGGGTTAAGGCTTGAGAACATGGGTCTAACAGGAAACATCGATGTTGAGTCATTGGGGTCAATGCCAGCCTTGAGGACACTTAGCCTAATGAACAATACCTTTGTTGGCTCATTGCCTAACATCAAAATGCTCACTAACTTGAAGGCACTCTTTTTGTCATATAACCATTTCTCAGGAGAGATACCTGATGATGCATTTTCCACTTTGCATAAATTGAGAAAAGTTTATCTCTCAAATAATGAGTTCACCGGTAAAATCCCATCCTCCCTTGCTACCTTGCCTAATCTTCTCATCCTTGCCCTCAATTCAAACAAGTTTCAAGGTCAAATCCCTGATTTTCCACACAAAAAATTGACCACTCTCAACCTCTCTAATAATGATTTTGAAGGTTCCATCCCCACCAATCTAACCACTTTCGACGCATCATCCTTTACAGGGAACTCACGTCTATGTGGAGCTCCTCTAAAGAATCCTTGCAAAGGTGAAGCCCCAACATCGGAGAGTTCAGCAGCTGGAAATATACGCATTGTGAAAATTTTACTTATAATTGTAATAATTGCAGTATTGATAGTAGCCCTGGTGGTTATAGTGTTGGTTATATGGCCTCGTTTAAGCTCCAATGATAATTATTCTAATAATAACCCATCTGAGGAATCATCATTCCAAGGAGGCCTAGGCATGCAGCCCTCTAAGAAGAAGTATGATAATAATAATAATCCTCCTCCCATTTATGTGAAGACCAAAAGCCTAGCAGAACACCATCACGATGATCATCATCATCATCCTAAACATGGTCATACCAAGAAAGGGAAAGGGGAACAAGCTGGGAAGCTGACATTCCTAAGGCATGATGAAGGCCAAATGTTTGACTTACAAGATTTGCTAAGAGCCTCAGCCGAGATTCTTGGGAGTGCTGGATTTGGGTCATCATACAAGGCAGTGATTATGGATGGACAAGCAGTGGTTGTGAAAAGGTACAAACAAATGAACAATGTAGGAAGAGAGGAATTCCATGAACACATGAGAAGGCTAGGCAACCTCAATCATCCAAATCTCCTACCTCTCCTTGCTTATTATTATAGGAAAGAAGAGAAGCTCTTGATTTCTTCCTATCTTCACAATGGTTGTTTGGCTACCCATCTTCATGGCAATCATAACTATCAAAAGCCTGGACTTGATTGGCCAACCCGTTTGAAAATAGTCAAAGGTATAGCTCGTGGTTTGGATTACCTATACAATGCACTCCCAAGCTTAATTGTCCCTCATGGTCATCTTAAATCTTCAAATGTTCTCTTAGATGAAAACTTAGAGCCTCTACTCACTGATTATGCCTTCAGTCCTGTCATCAACCTTGACCATGCTCAACAAGTCATCATGCCTTACAAATCACCTGAATATGCTCAACTTGGACGCATTACAAAGAAAACTGACGTGTGGAGTTTAGGAATTATAATACTTGAGATCTTGATTGGTAAATTCCCAGAGAACTATCTCACACACAGGCATAATCCTGATTCTGACATAGCCAATTGGGTGAATAACATGATTACTGAGAAGCGAACCACTGAGGTGTTTGATGTAGAGATGGGAGGAATGGGAAATAATAAAGCTGAACTGCTCAAACTCTTAAAGATTGGATTGAGTTGTTGTGAGGAGAATGTGGAGAGAAGGTTTGATATTAAGGAAGCTCTTGAGCAGATTGAAGAATTGAAAGTGGGTGATGAAACTGATATCATTGGAGATCAATACTCTTCTACTCTTATCACCACAGAAATCGATTCTTATAGAGCCGTGTGA 2073 0.4067 MPMGARSAMLVRAPPTSIYSHHNVYFFVLVLLLSIPCSCEYVSDGEALLKFKNSLRNVVSLSSWDPTINPKPPCSGNVPNWVGLLCMNDRVWGLRLENMGLTGNIDVESLGSMPALRTLSLMNNTFVGSLPNIKMLTNLKALFLSYNHFSGEIPDDAFSTLHKLRKVYLSNNEFTGKIPSSLATLPNLLILALNSNKFQGQIPDFPHKKLTTLNLSNNDFEGSIPTNLTTFDASSFTGNSRLCGAPLKNPCKGEAPTSESSAAGNIRIVKILLIIVIIAVLIVALVVIVLVIWPRLSSNDNYSNNNPSEESSFQGGLGMQPSKKKYDNNNNPPPIYVKTKSLAEHHHDDHHHHPKHGHTKKGKGEQAGKLTFLRHDEGQMFDLQDLLRASAEILGSAGFGSSYKAVIMDGQAVVVKRYKQMNNVGREEFHEHMRRLGNLNHPNLLPLLAYYYRKEEKLLISSYLHNGCLATHLHGNHNYQKPGLDWPTRLKIVKGIARGLDYLYNALPSLIVPHGHLKSSNVLLDENLEPLLTDYAFSPVINLDHAQQVIMPYKSPEYAQLGRITKKTDVWSLGIIILEILIGKFPENYLTHRHNPDSDIANWVNNMITEKRTTEVFDVEMGGMGNNKAELLKLLKIGLSCCEENVERRFDIKEALEQIEELKVGDETDIIGDQYSSTLITTEIDSYRAV 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0005 690 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 22 673 - -
Lal25g0005 690 Gene3D Phosphorylase Kinase; domain 1 357 463 - -
Lal25g0005 690 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 673 - -
Lal25g0005 690 MobiDBLite consensus disorder prediction 301 365 - -
Lal25g0005 690 Gene3D Ribonuclease Inhibitor 209 251 IPR032675 -
Lal25g0005 690 ProSiteProfiles Protein kinase domain profile. 388 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0005 690 SUPERFAMILY Protein kinase-like (PK-like) 392 666 IPR011009 -
Lal25g0005 690 Pfam Protein kinase domain 391 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0005 690 Pfam Leucine rich repeat N-terminal domain 43 86 IPR013210 -
Lal25g0005 690 Pfam Leucine Rich Repeat 209 227 IPR001611 GO:0005515
Lal25g0005 690 MobiDBLite consensus disorder prediction 301 336 - -
Lal25g0005 690 Pfam Leucine rich repeat 137 198 IPR001611 GO:0005515
Lal25g0005 690 Gene3D Ribonuclease Inhibitor 43 156 IPR032675 -
Lal25g0005 690 Gene3D Ribonuclease Inhibitor 157 207 IPR032675 -
Lal25g0005 690 SUPERFAMILY L domain-like 71 233 - -
Lal25g0005 690 Gene3D Transferase(Phosphotransferase) domain 1 464 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0005 Lal-Chr25 66471 68640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0005 20 678 Receptor kinase-like Gene Family AT5G35390 47.198 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal25g0005 Pkinase 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0005 - - gmx:100801053 870.537