Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1429 ATGGCACTAATCATATCTATGCTACTACTATTTGGAGGAGTTGTGCTCATGGTCCTACTTCATGTTTGCATCACTTGTAGATCCTCTAGAAGAGAAAGCACAGATTCAATGGTTGAGAATGGAGCAAATGGAAGCAGAAGCATATCCAAAGATGAATTGGAGAAGCTTCCATGCTATGATTACATTGCAAAAGACATTACAAGCAGCCCTGTGGATTGTGCAGTTTGCTTGGAGAACCTTATTGTTGGGGATAAGTGCAGGTTGTTGCCTATATGCAATCACAGTTTTCATGCTCAGTGTGTAGACACATGGCTTCTAAAGACACCCTTATGTCCAATATGTAGATCCTGTGCTGCTTCTTTTCACAATGAAAACCAATTTGTAAGTAACAATGAATACTTTGTTGAACTAGACAGTGAGTCTAGGGAAATCCAAAGTACCATAGAAAGTGGTCCATCTATAAATGTTGGTGTAGAATTGACAGAAAATGTAATAATAGGTAATAGACAAGTTGAATCAAGACAACAACATCAAATAGGTACAACTCAAAATCACATGATATCTTCTACTACTTTGTCTCATGCTGTTCAAGTTTGA 597 0.3769 MALIISMLLLFGGVVLMVLLHVCITCRSSRRESTDSMVENGANGSRSISKDELEKLPCYDYIAKDITSSPVDCAVCLENLIVGDKCRLLPICNHSFHAQCVDTWLLKTPLCPICRSCAASFHNENQFVSNNEYFVELDSESREIQSTIESGPSINVGVELTENVIIGNRQVESRQQHQIGTTQNHMISSTTLSHAVQV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1429 198 ProSiteProfiles Zinc finger RING-type profile. 73 115 IPR001841 -
Lal24g1429 198 Pfam Ring finger domain 72 115 IPR001841 -
Lal24g1429 198 SMART ring_2 73 114 IPR001841 -
Lal24g1429 198 PANTHER RING-H2 FINGER PROTEIN ATL3-LIKE 1 155 - -
Lal24g1429 198 SUPERFAMILY RING/U-box 57 119 - -
Lal24g1429 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 120 IPR013083 -
Lal24g1429 198 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1429 Lal-Chr24 15612438 15613034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1429 3 115 C3H Transcription Factor Family AT3G10910 31.452 3.57e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1429 - K15692 lang:109353575 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1429 24 15612438 15613034 Lal24g1429 24 15612438 15613034 ECH