Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1424 ATGCATGGGTTCGCTCGTGAACACAGCAAACAGAGGCAGCACATGTGGCCTCTACCTTCTAACGCGACCACTGTAGTCACCGATTCTCAATTTTTATGCAAAGATGGACGTAAGATTCGAGTTGGTGATTGTGCACTTTTTAAGCCTCCCCATGATTCCCCTCCATTTATTGGAATAATTCGTAGGTTAACATTCGATAAAGAAGAACATCCAAGTTTAGAAGTGAATTGGCTTTACCGACCTGCTGATTTGAAGCTTGCTAAAGGGATTTTCCTGGAAGCTGCTCCAAACGAGGTCTTCTACTCCTTTCACAAGGATGAAATATCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCTGCATTTGTCTGTAGACGGGTGTACGACATTGTGCGCAACTGTCTATGGTGGCTAACTGATCAGAACTACCTTAATGAAGAAATTAACCAGCTATTAGAGAAGACAAAACTAGATATGCATGGTGCAGTACAGTCTGGAGGCCGTTCGCCCAAACAGTTGAATGGTCCAACATCAACACAATCATTGAAGTCTGGTTCTGATAGCATTAAAAATAGCTCTTTTGGTGTACAGAGTAAGGGAAAAAAGAGGGAACGAGGTGACCAGGGATCTGATTCATCTAAAAGGGAGCGATTAGTTAAAGCAGAAGAGGGAGATTCTTGTCAATTTAGACTGGAGATCATGTTAAAATCTGAGATTTCTAAATTTACTGATAAAGGTGGGCTAGTGGACTTTGAAGGAGTTGAAAAACTGGTACAGCTCATGCAACCTGAAAGTGGTGATAAAAAAATAGATTTGGCTGGGAGAATAATGCTGGCGAATGTAATAGCAGTTACCGACCGGTATGACTGTCTTAGCTGGTTTGTTCAGCTCAAGGGTTTGCCTGTGTTGGATGAATGGCTCCAGGAGGTTCATAAGGGCAAAATTGGTGATGGTAATATGCCTAAAGAAAGTGACAAGTCTGTTGATGATTTTTTGTTGGCTTTACTTCGTGCATTGGATAAGCTTCCTGTGAATCTTAATGCACTACAGACCTGTAATGTGGGAAAGTCTGTTAATCATTTACGCTCTCACAAAAATGCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTTGACTCATGGAAGAAACGCGTGGAGGCTGAAATGAAGATGACTGATTCACAATCTGGTTCTACCCACCGTGTTTCTTGGCCAGCAAAGCAAGCATCTTCTGAGGTTTCTCAGGTTGGATATCGGAAAATCGGAGGATCTTCTGAGAATGTTGCGAAGAGCTCTGCAATTCAACCCTCAGTATCTAAAACTCCCCAGGCAAAGCCTAATTCTGGAGAACTATTGTCCAAGTCCTCTTCGTCTCCTGGCTCAGCTAAAGGGATGAGTACCTCAGCAGGCAGTAACTCAAAAGATCGAAACATGAAAGTGTTGGTTGGAGCTGTAACATCAGATCTACCAATGACACCTATCAAGGAGGAAAGGAGTAGTAGTTCTAGTCAGTCTCAAACCAACAGCTTATCTTGTTCTAGCGAACATGCAAAAACTGTTGGTTCTTATATGGAAGATGCAAGGAGTTCCACTGCCGCGTCAATGAGTGCTGGTAAAATTCATGGTGGTGTATCTCGAAATCGGAAGTCAAGCAATGGTCTGCATGGGGTTGGTCTTGCTGTACCTCAGAAGGAACCCAGGTCTTCAAAAACTTTAACTAGAAACACTCCTGCTGAAAAAGTCTCACCAACTCAAATGTCCCAGGAAAAATCACCTGATCGGCCCCTTGTCGATCAACAGAATAGTCAGCCACTGATTCTCAGGTTGCCAAACACTGGTCGAAGTCCTTCAAGGGGAGCTAGCGGGGGCACTTTTGAAGAACTTGTTTCATGTGACAAAGCTTCACCACCTGCTGAAAAGAATGAGAGTCCGGATAGAAGAGTGAGAGCTAAAACTGATCGTTTGCAGACCAATATTGCATCAAATTTGATAAATGATGCATCTGATGCTAATGGATCTTTGACTTGTCTTGAGGAAGGTAAGAGGTCTCCTATTGGTGATCAGCGGTGCATTGCCAGTGACGCGGGTGATAAACCAACTGAAGTATCGAAACCAACTGAAATATCGAAACCAACTGGTCTTTCATCTGGATTTGTTTCTAGATCAGGGCAGATTTATGATGCTTCTGTAAGTCCCATGGATGCATTAGTTGAAAGCTGTGTGAAAATTTCAGAAGCAAGTGCTTCTACTTCCCCTGGTGATGATGGGATGAACCTACTTGCTACTGTGGCTGCAGGGGAAATATCTGGATCCAAAAATGTTTCACCACTAGCTTCACCTGCGAGGAAGTCTCCTGAAGCAGGTGGGTGTAGCTCTGTCAATGATTGCAAGTCAAAACATTCTGTTGTAGGAGTTGTTCGTACTGTTGCACAGTCGGACATGGGGGCTATTGAAGAGCATCATTTGGAGTCTGTTGACCCATTGCAAGTCAAGAATGATTCAAGGCATTCTGATACGATGGTCTTACCCAATGGTTCTGGAGATGGTGAAGCCATGTCAACCAGTTCTGTTGAAAAAACTGGTGATGGCAGGACTAAAATGAATTTCTCCACTACAGATTTGCAGAATGCTGAAGGCCCTTGCCTACGGCCTGATACCAAAGAGGGTGCCTCAGAAACTACATTGCCAGCTATAGAGGAGACTGATGTGGAGCCTGGAGGAGCAAACCATTTAAATGACCAGAGGGAATTGGGATGTCAATGTGCTACAGGCAGTAGTTCAGACTCTAAATTAAAATCTAGAAGTTCCTCTTTTGATGAAGATATGAAGGTTGGTCATCTGGATGAGAGAGTCACAGAGGATGAGAAAATATCGGTTTCAAAGGAAGTCCTTACAAATGTAAATGTCGAAAAGGAAATAGATGAAAAATTGTCTGAGTTATCATCAGATGTTTGTCATGAGAACCGTATTATTGCAGAGAAACTGACAGGTACTGGCATATCAGTGCAAAAGCCTTCTCTTGTTGCAGAAAACTGTGATCCCAATGATTTGAAGGAGGATGGTATGCTACCTACTCCTTCTGGTAATGCCTCAATGGTAGGCAAGGATGAAAATGCCGATGACGTGAAGTCAGGTGAGGTTGAGCCTGACAATAAACCAATGGATCTGGACTCAGCAGTTTCAGCTGGTGTTAATGGACGTGTTGAACAGAATCTGGGTACAAATGAGGTTCTTTGTCACTGTTCTGACTTATCAGGTCATCCTGAGTTGCCAACAATTCCTGGAAAAGATAATGAAGTCCCCAAAACATCAGAGTGTAACTTAGATGGAATTGAATCTGAGGCTGTGCTAGAACGGCTTGCATTCAGTGTTAATCCACCCCTTCCAGATTCTGGGTCTGATACTGCAGTTAAACTCGACTTTGATCTAAATGAGGGGATTCCTGTAGATGATGTGAGCCAGGGGGAGATTGTTAGACAGGAAGAACCTACTACTTCATCTGCTGTTCATGCTCCTTGTGCATTGCCCTTTCCACTGTCTTCCATGTCTGGGAGCTTGTATGCTTCAATTACAGTGACGTCTGCTGCCAAGGGACCTGTTGTTCCACCAGAAAGCCCAATGCGGAATAAGGGGGAACTTGGATGGAAGGGATCGGCAGCTACAAGTGCATTTCGACCAGCTGAACCTAGGAAAAATGCTGAAGTGCCATCAAATACCAATGATATTCCTTCTATTGATTCTACTCCTATCAAACAAGCTCGCCCTCTTTTAGATTTTGATTTAAATGTGGCAGATGAACTCAGTTTTGACGATTTAGCTTCTCCTGGTTCTTTAGAATCTGGACCACATGATCGTAGCACAGTGGGTTTTGATCTTGATTTAAACAGAGTTGACGAAACCCCAGAAGCTGGGTCTTACTCTATGAGCAAAGTGGATATTCCTTCTTTACCAAGTAAGCTTTCATTGTCAAGTGGGATATCTAATGGTGGAAGTGTCTCAAGAGACTTTGACTTAAATAATGGACCAGGGCTTGATGAAGTGGGCACAGAAGTCACTGCTCGTAGTCAGCATATGAAAAGTACCATACCATTTCCTTCTGCTGTTCATGGCGCAAGAACAAATAATCCTGAATTTGGTAATTATTCTTGGTTTCCTCCATGCAATTCTTATTCTGCAATTACTGTCCCACCTCTTCTGCCTGGCAGAGGGGAGCAGAGTTATGTTGCTGGTGCCAGTGCACAGCGGATCATGGTTCCTACAGGTAGCACACCATTTGGTAGTGAATTCTACAGAGGGCCAGTGCTTTCATCCTCGCCTGCTGTTGCTTATCCACCTAATACGCCCTTTCCGTATCCAGGATTTCCATTTGAAACTAATTTCCCATTATCCTCAAACTCCTTTTCTGGTTGTTCAACAGCATTCATGGATTCATCAACGATGGGAGGACTTTGCTTCCCTACCATGCCTTTGCAGCCACTTGGGCCAGGTGGTGTTGTCTCATCCACATACCCCCGTCCGTACATAATGAGTCTCCCAGGTGGTACAAGTAATGTTATTCCTGACAGCAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGGTGGTGCAGATGCAGAGGGAAGAGACGATAGATTGCCTTCTGGATTGAGGCAAATGCCCGCCCCCAGTTCACAAGCTTTGACGGAGGAACACATGAAGATGTTTCAGGCGGCAGGTGTATTGAAGAGAAAGGAACCTGATGGTGGTTGGGATGGAACTGATAGATTTAGCTACAAGCAACCCTCATGGCAGTAG 4842 0.4391 MHGFAREHSKQRQHMWPLPSNATTVVTDSQFLCKDGRKIRVGDCALFKPPHDSPPFIGIIRRLTFDKEEHPSLEVNWLYRPADLKLAKGIFLEAAPNEVFYSFHKDEISAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIVRNCLWWLTDQNYLNEEINQLLEKTKLDMHGAVQSGGRSPKQLNGPTSTQSLKSGSDSIKNSSFGVQSKGKKRERGDQGSDSSKRERLVKAEEGDSCQFRLEIMLKSEISKFTDKGGLVDFEGVEKLVQLMQPESGDKKIDLAGRIMLANVIAVTDRYDCLSWFVQLKGLPVLDEWLQEVHKGKIGDGNMPKESDKSVDDFLLALLRALDKLPVNLNALQTCNVGKSVNHLRSHKNAEIQRKARSLVDSWKKRVEAEMKMTDSQSGSTHRVSWPAKQASSEVSQVGYRKIGGSSENVAKSSAIQPSVSKTPQAKPNSGELLSKSSSSPGSAKGMSTSAGSNSKDRNMKVLVGAVTSDLPMTPIKEERSSSSSQSQTNSLSCSSEHAKTVGSYMEDARSSTAASMSAGKIHGGVSRNRKSSNGLHGVGLAVPQKEPRSSKTLTRNTPAEKVSPTQMSQEKSPDRPLVDQQNSQPLILRLPNTGRSPSRGASGGTFEELVSCDKASPPAEKNESPDRRVRAKTDRLQTNIASNLINDASDANGSLTCLEEGKRSPIGDQRCIASDAGDKPTEVSKPTEISKPTGLSSGFVSRSGQIYDASVSPMDALVESCVKISEASASTSPGDDGMNLLATVAAGEISGSKNVSPLASPARKSPEAGGCSSVNDCKSKHSVVGVVRTVAQSDMGAIEEHHLESVDPLQVKNDSRHSDTMVLPNGSGDGEAMSTSSVEKTGDGRTKMNFSTTDLQNAEGPCLRPDTKEGASETTLPAIEETDVEPGGANHLNDQRELGCQCATGSSSDSKLKSRSSSFDEDMKVGHLDERVTEDEKISVSKEVLTNVNVEKEIDEKLSELSSDVCHENRIIAEKLTGTGISVQKPSLVAENCDPNDLKEDGMLPTPSGNASMVGKDENADDVKSGEVEPDNKPMDLDSAVSAGVNGRVEQNLGTNEVLCHCSDLSGHPELPTIPGKDNEVPKTSECNLDGIESEAVLERLAFSVNPPLPDSGSDTAVKLDFDLNEGIPVDDVSQGEIVRQEEPTTSSAVHAPCALPFPLSSMSGSLYASITVTSAAKGPVVPPESPMRNKGELGWKGSAATSAFRPAEPRKNAEVPSNTNDIPSIDSTPIKQARPLLDFDLNVADELSFDDLASPGSLESGPHDRSTVGFDLDLNRVDETPEAGSYSMSKVDIPSLPSKLSLSSGISNGGSVSRDFDLNNGPGLDEVGTEVTARSQHMKSTIPFPSAVHGARTNNPEFGNYSWFPPCNSYSAITVPPLLPGRGEQSYVAGASAQRIMVPTGSTPFGSEFYRGPVLSSSPAVAYPPNTPFPYPGFPFETNFPLSSNSFSGCSTAFMDSSTMGGLCFPTMPLQPLGPGGVVSSTYPRPYIMSLPGGTSNVIPDSRKWGSQSLDLNSGPGGGADAEGRDDRLPSGLRQMPAPSSQALTEEHMKMFQAAGVLKRKEPDGGWDGTDRFSYKQPSWQ 1613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1424 1613 MobiDBLite consensus disorder prediction 1032 1067 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 933 954 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 1209 1261 - -
Lal24g1424 1613 SMART TFS2_5 320 399 IPR003617 GO:0005634
Lal24g1424 1613 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 301 410 IPR035441 -
Lal24g1424 1613 SMART BAH_4 37 152 IPR001025 GO:0003682
Lal24g1424 1613 MobiDBLite consensus disorder prediction 1590 1613 - -
Lal24g1424 1613 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 267 401 IPR035441 -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 860 889 - -
Lal24g1424 1613 Pfam BAH domain 38 142 IPR001025 GO:0003682
Lal24g1424 1613 MobiDBLite consensus disorder prediction 782 806 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 1531 1576 - -
Lal24g1424 1613 ProSiteProfiles TFIIS N-terminal domain profile. 314 400 IPR017923 -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 699 727 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 401 665 - -
Lal24g1424 1613 CDD TFIIS_I 322 398 - -
Lal24g1424 1613 Pfam TFIIS helical bundle-like domain 348 397 IPR017923 -
Lal24g1424 1613 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1613 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 505 548 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 1048 1065 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 650 665 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 180 209 - -
Lal24g1424 1613 ProSiteProfiles BAH domain profile. 37 152 IPR001025 GO:0003682
Lal24g1424 1613 MobiDBLite consensus disorder prediction 1245 1259 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 403 487 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 174 232 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 1531 1546 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 578 631 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 210 232 - -
Lal24g1424 1613 MobiDBLite consensus disorder prediction 845 903 - -
Lal24g1424 1613 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1613 - -
Lal24g1424 1613 Gene3D - 25 243 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1424 Lal-Chr24 15569118 15575751 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lal24g1424 BAH 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1424 - - lang:109335858 2499.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1424 24 15569118 15575751 Lal24g1424 24 15569118 15575751 ECH
Lal12g1535 12 18598989 18606866 Lal24g1424 24 15569118 15575751 LSH