Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1418 ATGGGAAGTGGTGGAACAGAAGCTTTTCCTGATTTGGGTAAACATTGTGAACACCAAGATTGTTCCCTCCTTGATTTCCTTCCTTTTACTTGCCAAGGCTGCAAAAAGGTATTCTGCTTAGAACATAGATCCTACAAGTCCCACACATGCCCAAAATCTGACCATAACAGCAGAAAGGTGATTGTTTGCCAAACATGTTCCATGTCCATTGAGGAAACCATAGGACACATAGGACAAGAAGAGGAGACAGCTATCTTAAAGAAGCACCAAAAATCTGGAAAATGTGACCCCAACAAGAAGAATAAACCAATTTGTCCTGTTAAGCGCTGCAAGGAGATTCTAACATTCTCTAATACTAATACTTGCAAAACTTGCAACATCAAAGTGTGCCTCAAACACCGTTTCCCTGCTGATCATGCTTGTGGCAGAGTTGCTTCATCTTCTTTATCATCTTCTGCTGCTGCTTCTGCTAATGCTAATGGACATTGGAAAAATAGATTCTTGGCTGCTCTGGCTTCAAGGAATGGCCAAGACTGTTGCAAGAGTAAAGGGCATAATTCATCTTCTCCTTCTAATTCTTCTATTAAGGCCCATTGA 597 0.4121 MGSGGTEAFPDLGKHCEHQDCSLLDFLPFTCQGCKKVFCLEHRSYKSHTCPKSDHNSRKVIVCQTCSMSIEETIGHIGQEEETAILKKHQKSGKCDPNKKNKPICPVKRCKEILTFSNTNTCKTCNIKVCLKHRFPADHACGRVASSSLSSSAAASANANGHWKNRFLAALASRNGQDCCKSKGHNSSSPSNSSIKAH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1418 198 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 173 - -
Lal24g1418 198 Gene3D - 79 161 IPR035896 -
Lal24g1418 198 Gene3D - 2 64 IPR035896 -
Lal24g1418 198 ProSiteProfiles Zinc finger AN1-type profile. 99 149 IPR000058 GO:0008270
Lal24g1418 198 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 173 - -
Lal24g1418 198 SUPERFAMILY AN1-like Zinc finger 9 61 IPR035896 -
Lal24g1418 198 SMART AN1_Zf_4 105 146 IPR000058 GO:0008270
Lal24g1418 198 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Lal24g1418 198 SUPERFAMILY AN1-like Zinc finger 97 144 IPR035896 -
Lal24g1418 198 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Lal24g1418 198 Pfam AN1-like Zinc finger 105 143 IPR000058 GO:0008270
Lal24g1418 198 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1418 Lal-Chr24 15519031 15520454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1418 1 179 C2H2 Transcription Factor Family AT3G28210 58.659 5.22e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1418 - - adu:107491409 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1418 24 15519031 15520454 Lal24g1418 24 15519031 15520454 ECH