Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1414 ATGGAGACTTCAGAGAAGGTGGTTGCTGTGATTATGGTGGGTGGACCCACTAAAGGGACCAGATTTAGACCTCTTTCATTCAATACTCCAAAACCCCTTTTCCCTTTGGCTGGCCAACCAATGGTTCATCATCCTATTTCTGCTTGTAAAAAGATACAAAATTTGGCTCAAATTTATCTTGTTGGATTCTATGAGGAGCGAGAATTCGCTCTATATGTCTCTTCAATTTCATATGAGCTAAAATTGCCAGTAAGATATTTGAAGGAGGATAAACCACATGGTTCAGCAGGTGGCCTTTACTACTTCAGAGATATTATCATGGAAGACAATCCGTCACATATCTTTCTGCTAAATTGTGATGTTTGCTGCAGTTTTCCACTATCATCCATGCTTGAAGCTCATAGAAGATATGGTGGGATTGGGACAATGTTGGTAATCAAGGTTTCTGCAGAATCTGCCAGTCAGTTCGGTGAGTTGGTTGCTGATCCAATCACTAATGAATTGCTGCATTATACTGAGAAACCGGAGACTTTCGTTAGCAATTTGATAAATTGTGGTGTCTACATTTTCACCCCTGATATTTTTAATGCCATCGAAGATGTATCTATGAATCGAGAAGGCAGAGCTAATCTACGCCGTGTCTCCAGCTTTGAAGCACTTCAATCTGCCACAAGGACTCTTCCCTCGGATTTTGTTAGACTGGATCAAGATATATTATCTCCTCTAGCTGGAAAAAAACAACTGTATACATATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCAGGAATGTCTTTGAAATGCTCGGAGTTGTATCTTGCGCAATTCCGGTATACTTCACCCCATCTTTTGGCAAGCGGAGATGGTAAAAGGAACCCTACAGTTGTTGGTGATGTATATATTCACCCCTCTGCAAAAGTTCATCCATCTGCAAAGATTGGTTCCAATGTTTCCATCTCAGCTAATGTTCGCGTAGGTGCTGGCGTCAGGTTGATCCATTGTATCATCCTGGATGATGTTGAAATCAAGGAAAATGGTTTAGTTATAAACTCTATTGTCGGATGGAAATCATCGATCGGAAGATGGTCAAGGGCTGATGGTGACTACAATGCAAAGCTTGGCACAACTATCCTAGGAGAAGCTGTGATAGTTGAAGATGAGGTGGTGGTGATCAACAGCATAGTTCTTCCCCATAAGACTCTCAATGTCAGTGTACAAGAAGAAATCATCTTATAA 1239 0.4092 METSEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPISACKKIQNLAQIYLVGFYEEREFALYVSSISYELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDNPSHIFLLNCDVCCSFPLSSMLEAHRRYGGIGTMLVIKVSAESASQFGELVADPITNELLHYTEKPETFVSNLINCGVYIFTPDIFNAIEDVSMNREGRANLRRVSSFEALQSATRTLPSDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSELYLAQFRYTSPHLLASGDGKRNPTVVGDVYIHPSAKVHPSAKIGSNVSISANVRVGAGVRLIHCIILDDVEIKENGLVINSIVGWKSSIGRWSRADGDYNAKLGTTILGEAVIVEDEVVVINSIVLPHKTLNVSVQEEIIL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1414 412 CDD M1P_guanylylT_A_like_N 9 273 - -
Lal24g1414 412 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Lal24g1414 412 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 5 412 - -
Lal24g1414 412 Gene3D Hexapeptide repeat proteins 286 409 - -
Lal24g1414 412 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 5 412 - -
Lal24g1414 412 Pfam Nucleotidyl transferase 9 208 IPR005835 GO:0009058|GO:0016779
Lal24g1414 412 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1414 Lal-Chr24 15484876 15490101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1414 19 200 Eukaryotic Initiation Factors Gene Family AT2G34970 23.288 1.74e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1414 K00966 - fve:101314646 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1544 12 18678799 18685183 Lal24g1414 24 15484876 15490101 LSH