Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1395 ATGGCTGTAAGTGCAACTAAGGTTGCTTTAATCTTATTGATTACTATGGCCATTATTATTCCATGCTTTGAATGTGGAATTGCTGAGTTTGATGATTATCTTAAAGCTCAAGCTGAAGAAGCTCGTAAACTCACTCTTCAAACCTATGTCCCTAACCCTGAAGGTATTGCTGAGGCCCTAAATCTACAGGTTCATAGGAAGTTGGAAGAGGATACAATAAGAAAGGAGCTAAGAGAAAGAGATAAAAGAAAAGTATATTGA 261 0.3678 MAVSATKVALILLITMAIIIPCFECGIAEFDDYLKAQAEEARKLTLQTYVPNPEGIAEALNLQVHRKLEEDTIRKELRERDKRKVY 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1395 86 Pfam Pectate lyase, N terminus 27 75 IPR007524 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1395 Lal-Chr24 15338336 15339166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1395 8 85 Polysaccharide Lyase AT2G02720 30.769 1.16e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1395 - K01728 lang:109354713 135.576