Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1391 ATGTCAGATATGTCTAGTCTTTGTGCTATAAATATAGAGGATAAGATAATTCCTTCCATTTTCTCTGAAGAAAACTGCATAACTCAAATGGATGCAAAGGAAGATAATCTGAAATCTGCCAAAGCTGAAATGGGAGAGGTGAAAGAAGAAAATGAAAGATTGAAAATGATGCTAGAGAGAGTTGAAAAAGATTACCACTCTCTTCAACTTCTTTTCTTTGATATCCTTAATAGAGAAGCACCCAACAAAGGTGTAGAAGATTCAGATACTTCTCCTAATGAAGTGGAAGAACCTAAGTTTGTGTCACTTTGTCTTGGAAGAACCCCAAAGGAGCCTAAAAAAGAAGAAAAAATCAGTAACTATAGTAAACCTAAAGAAAATGGAGATTTTGAAGACAACCTTAAACTTGGTTTGGAACTGGTTTCTGATCATAGTAATAACATGAAAATGTCAGAAGAACTAAAGAAAACAGAAGCAGGAGGAACATGTTCATCAAATATATTAGTAAGGACCAAAGATGGTGTTGATGAAATTTTGGAACAAATTCCTACCAAGAGAGCTAGAGTTTGTGTTAGAGCTAGATGTGATACTCTCACGATGCATGATGGATGTCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGTCCAAGGGCATACTATCGTTGCACTGTTGCTGCAGCATGTCCTGTGAGGAAACAGGTACAAAGATGTGCTGAGGACATGTCAATTTTAATCACTACATATGAAGGAAGCCACAACCATCCACTTCCTGTTTCAGCCACAGCCATGGCTTCAACAACTTCTGCTGCTGCTTCCATGCTATTGTCAGGTTCTTCATCATCTCAGCCCGAAAATCGTCACAATTCTGTGTTTTTCGGCAATGCTCCTACACTACTCAATGGTCTGAGTTTCAGTCATTTTGATCACTCAAGTGCAAAACAAGTCTTCTTACCAAACCCTGCCTCACAGAATTTGTTCCCAACAATCACTCTAGACCTCACTTCAGCTTCATCCTCCGCAACAACTAATTTCAATCGTTCATCTTCGACTTTCGCCTCAACACCGAGATTTCCTCCTTTAAGTCTAAGTTTCTGCTCTCCAGAACCCAACATTATACCATCATTTTGGGGTAATAAGGGAGTCCCTAATATAGGCACAATGAGAGTTAACAAAACCCACATTAGGCCACTTAATATGGGAAACCAATTTGAAGAAAATCTCTATCAACACTGCATCAAAAACCAAACTCCTTTCAAAGAGGCTTTAGCAGAAACACTCACTAAAGCAATTAGTACAGATCCAAGTCTTCGATCCGCGATCGCAGCCGCAGTTTCATCTATAGGCAGGCAAGGATCAATCAATGCTAAGCATGGAGGAGAAGAGATTCTAGGTTCAGGGTTGAGCTTGAAACTTGGAGAGCATCCTCAATACCCTTCTTCCAATCACTTGAACCAAAATGGTAAAGGATGCATAGCAGGCTATTTCAACAAATCATCATCATCATCATCATCATCGAGTTCCGAGGTCGGAAACTTCATGCTTCTCCAACCTCCACAGCCATTTTCTATATCCAAGAGAACTACACCTCCTTCCAATGTTGATCCCATCAACCATTGGATTCCAGAGATAGGCCATTTCTACTCCAAAACTACCTTGTAG 1671 0.3968 MSDMSSLCAINIEDKIIPSIFSEENCITQMDAKEDNLKSAKAEMGEVKEENERLKMMLERVEKDYHSLQLLFFDILNREAPNKGVEDSDTSPNEVEEPKFVSLCLGRTPKEPKKEEKISNYSKPKENGDFEDNLKLGLELVSDHSNNMKMSEELKKTEAGGTCSSNILVRTKDGVDEILEQIPTKRARVCVRARCDTLTMHDGCQWRKYGQKIAKGNPCPRAYYRCTVAAACPVRKQVQRCAEDMSILITTYEGSHNHPLPVSATAMASTTSAAASMLLSGSSSSQPENRHNSVFFGNAPTLLNGLSFSHFDHSSAKQVFLPNPASQNLFPTITLDLTSASSSATTNFNRSSSTFASTPRFPPLSLSFCSPEPNIIPSFWGNKGVPNIGTMRVNKTHIRPLNMGNQFEENLYQHCIKNQTPFKEALAETLTKAISTDPSLRSAIAAAVSSIGRQGSINAKHGGEEILGSGLSLKLGEHPQYPSSNHLNQNGKGCIAGYFNKSSSSSSSSSSEVGNFMLLQPPQPFSISKRTTPPSNVDPINHWIPEIGHFYSKTTL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1391 556 MobiDBLite consensus disorder prediction 111 130 - -
Lal24g1391 556 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 535 IPR044810 GO:0003700
Lal24g1391 556 SUPERFAMILY WRKY DNA-binding domain 193 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal24g1391 556 Pfam WRKY DNA -binding domain 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g1391 556 Gene3D WRKY domain 185 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal24g1391 556 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 35 535 - -
Lal24g1391 556 Coils Coil 23 71 - -
Lal24g1391 556 ProSiteProfiles WRKY domain profile. 195 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal24g1391 556 SMART WRKY_cls 200 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1391 Lal-Chr24 15299874 15303641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1391 44 529 WRKY Transcription Factor Family AT5G15130 41.220 1.41e-85 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal24g1391 WRKY 1.7e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1391 24 15299874 15303641 Lal7g1404 7 19007474 19011516 ECH
Lal24g1391 24 15299874 15303641 Lal17g1000 17 8106561 8113683 ECH
Lal24g1391 24 15299874 15303641 Lal24g1391 24 15299874 15303641 ECH
Lal6g0866 6 5888441 5892309 Lal24g1391 24 15299874 15303641 ECH