Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1386 ATGGAAATCATTAAGCAGAAACCAACCATAGTTGAAGATGTATTGGATGGAAAAACCTTGCTTGAGGTTAACGGTAACATCGAATTTAAGGATGTTGCTTTCAGCTATCCATCAAGGCCAGATGTGATGATATTTTCCAAATTCTCGATATTTTTCCCGGTTGGAAAAACCGTTGCGGTTGTTGGCAGTAGCGGATCTGGTAAGAGCACCGTTGTTTCCTTGATAGAAAGGTTCTATGATCCCAATGAAGGTCAAGTTTTGCTTGATAACGTCGACATTAAGACACTACAAATAAAATGGTTACGCGACCAAATTGGTTTGGTGAATCAAGAACCGGCACTCTTTGCAACTACCATTCTTGAGAATATACTCTATGGTAAACCTGATGCAACAATAGCTGAAGTGGAAGGTGCTACTTCTGCAGCAAATGCACATAGCTTTATTACTTTGCTTCCTAATGGCTATAACACTCAGGTCGGAGAGCGAGGTGTGCAATTATCCGGGGAGAGAATTGTAATTGCCAGAGCTATGTTGAAAAATCCAAAGATCCTTCTTTTGGATGAAGCAACCAGTGCTCTTGATGCAGGGTCTGAAAGCATTGTTCAAGAGGCATTAGACCGTCTCATGATTGGAAGAACAACCGTGGTTGTTGCGCATCGGTTATCAACCATAAGGAATGTTGACACCATTGCAGTTATACAGCAAGGGCAAGTTGTTGAGACTGGAAGTCATGAAGAACTTATAGCCAAGGTAGGCACCTATGCCTCGCTGATCAGGTTTCAAGAAACGGTAGGAAATAGGGACTTATCCAACCCATCAACTCGAAGGACACGCTCATCGCGGTCGAGTCACTCGTTCTCAACAAAGTCCTTAAGCCACCGGTTTGGAAGCTTAAGGAACTTGAGCTTCCAGTACAGCACTGGAGCCGATGGTCGCATTGAGGTGATATCGAATGGTGAAACAGATAAGAAAAATCGAGCCCCGGAAGGGTATTTCTTCCGTTTGCTTAAGCTAAATGCTCCTGAATGGCCTTACTCAATTATGGGAGCTATTGGTTCTGTTCTCTCTGGACTTATTGGACCAACATTTGCTATTGTTATGAGCAATATGATTGAAGTGTTTTACTATTCAAATTATGCATCAATGGAGAGGAAGACCAAGGAGTATGTTTTTGTATACATTGGAGTTGGTCTTTATGCAGTTTTTGCTTACTTGATACAACATTACTTTTTTAGTATCATGGGAGAAAACCTCACCACAAGGGTTAGAAGAATGATGCTTGCTGCTATTTTGAGGAATGAAGTTGGATGGTATGATGAAGATGAGCACAACTCAAGCATTGTTACAGCTAGACTAGCAAGTGATGCAGCTGATGTGAAATATGCTATTGCTGAGAGAATATCAGTGATATTACAAAACATGACATCACTCCTCACTTCTTTCATTGTTGCTTTCATAGTTGAATGGAGGGTTTCCTTCCTCATCCTAGCAACTTTCCCTCTTCTTGTTCTTGCTAATTTTGCTCAGCAACTATCTCTTAAAGGGTTTGCTGGAGACACAGCCAAGGCTCATGCAAAGACAAGTATGATTGCAGGAGAAGGAGTAAGCAACATTAGAACAGTTGCAGCATTGAATGCTCAAAACAAAATGTTGTCCATGTTTTGCCATGAGCTCCGGGACCCACAATTTTGCAGCCTGCGCCGAAGCCAAACATCCGGGCTCTTGTTTGGCATCTCTCAGCTTGCCCTGTATGCCTCTGAGGCTCTAATTCTATGGTATGGTGCACATTTGGTCAGCAAAGGCGTTTCGACCTTTTCGAATGTCATCAAGGTCTTTGTAGTATTAGTCGTTACTGCAAATTCAGTCGCAGAAACTGTGAGCCTTGTGCCTGAGATAATTCGTGGTGGCGAATCTATTGGCTCGGTGTTCTCAATTCTTGATCGGTCAACTAAGATCGACCCTGATGATCCTGATGCCGAGATGGTTGAATCACTTCGCGGGGAGATTGAACTTAGACATGTTGATTTTGCATACCATTCAAGGCCTGATGACATGGTGTTTAAGGATCTTAGTCTTAGAATCCGCACGGGTCAGAGCCAGGCACTTGTTGGGGCAAGTGGTTCGGGGAAGAGTTCAGTTATTGGGCTGATAGAGCGGTTTTATGACCCTATTGCTGGTAAAGTTATGATTGATGGAAAGGACATAAGGAAGTTGAATTTGAAGTCTTTAAGGCTTAAGATTGGTTTGGTGCAACAAGAGCCTGCTTTGTTTGCATCAAGCATTTTTGAAAACATTGCATATGACAAAGATGGTGCAACCGAAGCCGAGGTGATCGAAGCAGCGCGCGCTGCGAATGTTTATGGTTTTGTTAGTGGTTTTCCCGAGGGTTACAAGACCCTGGTTGGTGAAAGAGAGGTCCAACTCTCTGGTGGTCAAAAGCAAAGAATCGCTATTGCAAGGGCTGTTCTCAAGGACCCCACAATACTTCTACTTGATGAGGCCACAAGTGCACTTGATGCTGAATCTGAGCGTGTCCTACAAGAAGCATTGGTGAGGCTAATGAAAGGCCGCACCACCGTTCTCGTGGCTCATCGGTTATCGACCATTAGAGGGGTTGACAACATCGGCGTGGTGCAAGATGGGCGCATTGTGGAGCAAGGAAGCCATAATGAATTGCTCAGTAGACCAGAGGGAGCATATTCTAGACTATTGCAGCTACAACATCACATATGA 2733 0.4365 MEIIKQKPTIVEDVLDGKTLLEVNGNIEFKDVAFSYPSRPDVMIFSKFSIFFPVGKTVAVVGSSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQIKWLRDQIGLVNQEPALFATTILENILYGKPDATIAEVEGATSAANAHSFITLLPNGYNTQVGERGVQLSGERIVIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMIGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGSHEELIAKVGTYASLIRFQETVGNRDLSNPSTRRTRSSRSSHSFSTKSLSHRFGSLRNLSFQYSTGADGRIEVISNGETDKKNRAPEGYFFRLLKLNAPEWPYSIMGAIGSVLSGLIGPTFAIVMSNMIEVFYYSNYASMERKTKEYVFVYIGVGLYAVFAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWYDEDEHNSSIVTARLASDAADVKYAIAERISVILQNMTSLLTSFIVAFIVEWRVSFLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAALNAQNKMLSMFCHELRDPQFCSLRRSQTSGLLFGISQLALYASEALILWYGAHLVSKGVSTFSNVIKVFVVLVVTANSVAETVSLVPEIIRGGESIGSVFSILDRSTKIDPDDPDAEMVESLRGEIELRHVDFAYHSRPDDMVFKDLSLRIRTGQSQALVGASGSGKSSVIGLIERFYDPIAGKVMIDGKDIRKLNLKSLRLKIGLVQQEPALFASSIFENIAYDKDGATEAEVIEAARAANVYGFVSGFPEGYKTLVGEREVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESERVLQEALVRLMKGRTTVLVAHRLSTIRGVDNIGVVQDGRIVEQGSHNELLSRPEGAYSRLLQLQHHI 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1386 910 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 347 634 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal24g1386 910 Pfam ABC transporter 688 836 IPR003439 GO:0005524
Lal24g1386 910 Pfam ABC transporter 49 191 IPR003439 GO:0005524
Lal24g1386 910 Gene3D ABC transporter type 1, transmembrane domain 297 657 IPR036640 GO:0005524|GO:0016021
Lal24g1386 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 261 IPR027417 -
Lal24g1386 910 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 260 IPR003439 GO:0005524
Lal24g1386 910 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 908 IPR039421 -
Lal24g1386 910 CDD ABC_MTABC3_MDL1_MDL2 669 907 - -
Lal24g1386 910 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 671 905 IPR003439 GO:0005524
Lal24g1386 910 MobiDBLite consensus disorder prediction 267 288 - -
Lal24g1386 910 ProSitePatterns ABC transporters family signature. 808 822 IPR017871 GO:0005524
Lal24g1386 910 CDD ABC_6TM_Pgp_ABCB1_D2_like 336 652 - -
Lal24g1386 910 PANTHER ABC TRANSPORTER TAP-LIKE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 908 - -
Lal24g1386 910 SUPERFAMILY ABC transporter transmembrane region 334 654 IPR036640 GO:0005524|GO:0016021
Lal24g1386 910 SMART AAA_5 54 237 IPR003593 -
Lal24g1386 910 SMART AAA_5 696 882 IPR003593 -
Lal24g1386 910 Pfam ABC transporter transmembrane region 347 618 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal24g1386 910 CDD ABC_MTABC3_MDL1_MDL2 27 261 - -
Lal24g1386 910 Gene3D - 659 909 IPR027417 -
Lal24g1386 910 Gene3D - 18 269 IPR027417 -
Lal24g1386 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 658 907 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1386 Lal-Chr24 15252651 15260302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1386 3 907 Calmodulin-binding Proteins AT2G36910 53.182 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1386 K05658 - gmx:100797124 1550.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1386 24 15252651 15260302 Lal24g1386 24 15252651 15260302 ECH