Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1385 ATGGAGAAGAGTGACATGGAAAAGATTGATGATGTGATATTGCCAGGTTTTAGGTTTCACCCCACAGATGAAGAACTTGTTGATTTTTATCTTAAGAGAAAAATTCAGCAGAAATCTCTTCCTATTGAGCTGATTAAGTTGGTGGATATTTATAAACATGATCCTTGGGACCTTCCAAAATTGGCAAGTAGTGGAGAAAAAGAGTGGTACTTTTATTGTCCAAGGAAGAGAAAATATAAGAACAGTGCAAGGCCTAATCGAGTTACAAGAACTGGGTTTTGGAAAGCCACTGGAACTGATAGACCTATATACTCTTCAGATGGAAAATGCATTGGTTTGAAGAAATCACTTGTGTTCTATAGAGGTAGAACTTCCAAAGGAATGAAAACTGATTGGATGATGCATGAGTTTAGGTTACCATGCATTTCAGACTCATCAGAACCTCCCAAGAGTTTTTCAGAAAAAAGCATCACTGCAAGTGATTCATGGGCAATCTGTAGGATATTCAAGAAAACCACTTCAATGTCAATGGCACAAAAAGCTTTATCTCAATCTTGGTTCTCTCAATTACCAGAAACCATGGTCTCTAATATATTCACACAGAGTGGTGCAAACTGCAACCTCAACAATCAATTCAACAATTCAGATAACAACATATCTTCTTACCCAACAATAGAAACAACACCATCAACCATTCAACAATTTCAGCATCAACAACAACAAGAGTTACACCAACTCTCATCTTCAGATATTCTATCTTATAAACCAATCATTAGTAATGACCCCACAAACCCTACTACTGATGATAGCTTCATATTCTACACACTTGACAACATAGGTTTTGAAGATATAAATAATAATCAGCACAATGGCTTCTCAATTAGTCTACCTCATGATATGCAAATGCAACCAAACATGCCAAGTCCAGTGCAGCTTAATGGGTTATTCCCTTTCAATTTGCCTCCAAATGATGATGATGATCCTATTTTCCCATGGGACTCACACCCTTGCCCCAATGATATGTTCACTAATAAATGTTACACAACTAATTAA 1053 0.3666 MEKSDMEKIDDVILPGFRFHPTDEELVDFYLKRKIQQKSLPIELIKLVDIYKHDPWDLPKLASSGEKEWYFYCPRKRKYKNSARPNRVTRTGFWKATGTDRPIYSSDGKCIGLKKSLVFYRGRTSKGMKTDWMMHEFRLPCISDSSEPPKSFSEKSITASDSWAICRIFKKTTSMSMAQKALSQSWFSQLPETMVSNIFTQSGANCNLNNQFNNSDNNISSYPTIETTPSTIQQFQHQQQQELHQLSSSDILSYKPIISNDPTNPTTDDSFIFYTLDNIGFEDINNNQHNGFSISLPHDMQMQPNMPSPVQLNGLFPFNLPPNDDDDPIFPWDSHPCPNDMFTNKCYTTN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1385 350 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Lal24g1385 350 Gene3D NAC domain 22 176 IPR036093 GO:0003677|GO:0006355
Lal24g1385 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 345 - -
Lal24g1385 350 SUPERFAMILY NAC domain 12 171 IPR036093 GO:0003677|GO:0006355
Lal24g1385 350 ProSiteProfiles NAC domain profile. 13 171 IPR003441 GO:0003677|GO:0006355
Lal24g1385 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 94-RELATED 2 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1385 Lal-Chr24 15233376 15236843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1385 2 186 NAC Transcription Factor Family AT5G39820 66.162 9.31e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal24g1385 NAM 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1385 - - lang:109339445 508.834