Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1378 ATGCTTCACAAAGGTTTTGAAGAATTTGGTAACATGAGGAAGCGTCAAGTAGTAGTGAGAAGATTAGAGGGACCACCTTCAAGAAGTGTTAGGAGTGTGAAATATGGAGAGTGCCAAAAGAATCATGCTGCTAATGTAGGAGGATATGCTGTTGATGGTTGCAGAGAATTCATGGCAAGTGGTGATGAAGGTACAAGTTCTGCTCTCATTTGTGCTGCTTGTAACTGCCATAGAAACTTCCACAAAAAAGAGGTTGAGACTGAAACAGTGAGTGAATGCTCTTCACCAACCTCTTCTGGAACATGA 306 0.4183 MLHKGFEEFGNMRKRQVVVRRLEGPPSRSVRSVKYGECQKNHAANVGGYAVDGCREFMASGDEGTSSALICAACNCHRNFHKKEVETETVSECSSPTSSGT 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1378 101 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 34 85 IPR006456 -
Lal24g1378 101 PANTHER MINI ZINC FINGER PROTEIN 1-LIKE 24 100 - -
Lal24g1378 101 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 24 100 - -
Lal24g1378 101 Pfam ZF-HD protein dimerisation region 33 85 IPR006456 -
Lal24g1378 101 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 35 84 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1378 Lal-Chr24 15118531 15119203 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1378 12 100 Zinc finger-homeobox gene family AT3G28917 62.626 1.49e-38 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lal24g1378 ZF-HD_dimer 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1378 - - lang:109339447 164.081