Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1367 ATGAGACGCTTGAATAGATGTCGTAAAAGCTGTAGACTCCGATGGTTTAATTATCTGAATCCAAAAATTAAACGTGGAGAGTTTTCTGAGGATGAAGTTGATTTGATGTTAAGATTGCATAGACTTCTCGGAAACAGATGGTCCCTTATTGCTGGAAGACTTCCGGGAAGAACTCCTAATGATGTGAAAAACTATTGGAATTCCTACATTGGAAAGAAGGAATCATCTCATAATCATAAGGAAAATATGAATTCAAGGCAAAAGGAAATAATTATGGAACCTCATGTTGTGATAAAGCCAAAGCCTCAAACTCTTTCAACAACTAGGCCATGTTTAAGAGAGAAAATGATTAGAGAAGATCAAAGTGAAATCAAAGAATGCACTACTTATCAATTATGTGATGCAGCTTCATTAGAGTGTAATAATAATTCTTCAGATAAATGGTGGGAAAATATGTTAGAAGACATGAAAAACAATGAAGTGAACAACTTGGATGAACATGGAGGTGGTGACTTTGTTTTAGATGATCAAAGTTGGGAGGATTTTCTTGTTGATATTAATTGGTGGGATTCATGA 576 0.3472 MRRLNRCRKSCRLRWFNYLNPKIKRGEFSEDEVDLMLRLHRLLGNRWSLIAGRLPGRTPNDVKNYWNSYIGKKESSHNHKENMNSRQKEIIMEPHVVIKPKPQTLSTTRPCLREKMIREDQSEIKECTTYQLCDAASLECNNNSSDKWWENMLEDMKNNEVNNLDEHGGGDFVLDDQSWEDFLVDINWWDS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1367 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Lal24g1367 191 SMART sant 24 72 IPR001005 -
Lal24g1367 191 CDD SANT 27 70 IPR001005 -
Lal24g1367 191 Gene3D - 26 92 - -
Lal24g1367 191 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Lal24g1367 191 Pfam Myb-like DNA-binding domain 25 69 IPR001005 -
Lal24g1367 191 SUPERFAMILY Homeodomain-like 5 79 IPR009057 -
Lal24g1367 191 Gene3D - 2 24 - -
Lal24g1367 191 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 189 - -
Lal24g1367 191 PANTHER MYB TRANSCRIPTION FACTOR 4 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1367 Lal-Chr24 14961683 14962606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1367 4 111 MYB Transcription Factor Family AT1G66370 58.772 1.56e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal24g1367 Myb_DNA-binding 9.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1367 - K09422 lang:109335100 222.246