Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal24g1361 | ATGCAACGTGCAGAGGTGTGTGTGATGGCGGGGGCTGGAGGATTGTCGGTTGTGTCTGTCTGGGATGGTGGCTGCACACCAGTGAATGCATTGTGGTGGGTTACAGAGGGGCAGGATTCTGGCTTCAATCGCATTCATTCCAGTGAAGTTGCTTCTCCAGTTGTTGGGAACCGCTTTCCAGGGTATATTGATTATCAAGGAGTAGGAATGAGGCCACAGTTCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCATCCCCGCGAAATAATGACCGAGGTCCTTAAAGCTCTGCAAGAGTTGAATGTTTGTTGGAAGAAGATTGGACATTACAACATGAAGTGCAGATGGGTTGCTGGCATTCCTGGTCATCATGAAGAAATGGTTAACAATTCTGTGCATAATAATCATTACTTTGGAAATGATTCCAGCATTATTGAGAATGATGCTGTTTCTAAGTCAAATGTGATCAAGTTTGAAGTGCAGCTTTACAAAACTCGCGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTCCAGGGTCCACAGTTCCTTTTCTTGGATCTTTGTGCTGCTTTCCTCGCTCAGCTTCGCGTTCTCTAG | 609 | 0.4647 | MQRAEVCVMAGAGGLSVVSVWDGGCTPVNALWWVTEGQDSGFNRIHSSEVASPVVGNRFPGYIDYQGVGMRPQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGIPGHHEEMVNNSVHNNHYFGNDSSIIENDAVSKSNVIKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal24g1361 | 202 | PANTHER | SERINE/THREONINE KINASE | 48 | 201 | - | - | |
| Lal24g1361 | 202 | Gene3D | Kinase associated domain 1, KA1 | 83 | 200 | - | - | |
| Lal24g1361 | 202 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 48 | 201 | - | - | |
| Lal24g1361 | 202 | Pfam | Kinase associated domain 1 | 159 | 201 | IPR001772 | - | |
| Lal24g1361 | 202 | SUPERFAMILY | KA1-like | 61 | 201 | IPR028375 | - | |
| Lal24g1361 | 202 | ProSiteProfiles | Kinase associated domain 1 (KA1) profile. | 153 | 201 | IPR001772 | - | |
| Lal24g1361 | 202 | CDD | AMPKA_C | 77 | 199 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal24g1361 | Lal-Chr24 | 14885357 | 14891826 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal24g1361 | K07198 | - | gmx:100796687 | 306.99 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal24g1361 | 24 | 14885357 | 14891826 | Lal24g1361 | 24 | 14885357 | 14891826 | ECH | |
| Lal13g1793 | 13 | 17418539 | 17426859 | Lal24g1361 | 24 | 14885357 | 14891826 | LSH |