Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1360 ATGGATGGACCAACTGGCCGGGGTGGTGGTGGAGGTGTGGACATGTTTCTACCAAATTACAAGTTAGGAAAAACACTAGGCATTGGGTCCTTTGGCAAGGTGAAAATTGCAGAGCATGTATTGACTGGTCATAAAGTTGCCATAAAGATCCTTAACCGTCGAAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGGGAAATCAAAATTTTAAGATTATTCATGCATCCTCATATTATACGACTTTATGAGGTCATAGAAACCCCAACAGACATATATGTGGTTATGGAATATGTGAAATCCGGAGAGCTCTTTGACTATATAGTCGAAAAGGGTAGGTTGCAAGAAGATGAAGCCCGGAATTTTTTCCAGCAGATAATTTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTTCATAGAGACTTGAAGCCTGAGAATTTACTTTTGGACTCTAAATGTAATGTCAAGATTGCTGATTTTGGCTTGAGCAACATTATGCGTGATGGTCACTTTCTTAAGACAAGTTGCGGAAGCCCTAACTATGCAGCTCCAGAGGTCATCTCTGGGAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATATGCTCTTCTCTGTGGCACTCTCCCCTTTGACGATGAAAACATTCCTAACCTCTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCAAGTCATCTATCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTAGTGGATCCTATGAAGAGGATGACCATACCTGAGATACGTCAACACCCTTGGTTCCAAGCACGTCTTCCACGATATTTAGCAGTGCCACCACCAGATACATTGCAGCAAGCCAAAAAGATTGACGAAGAGATTCTTCAGGAAGTGGTTAATATGGGATTTGACAGGAATCAGTTAGTTGAATCTCTTTGCAACAGGCTACAAAATGAGGTTTGTGCTCATCATTTTCTCTGTGTATATGCCAACTTGTCTCTTACCACCATCCATGTATTTCAGGGTACTGTTGCATACTATTTGTTATTGGACAACCGGTTCCGTGTTTCTAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACAATGGTTGGTTCGTTTTCTCTTTAG 1140 0.414 MDGPTGRGGGGGVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTLQQAKKIDEEILQEVVNMGFDRNQLVESLCNRLQNEVCAHHFLCVYANLSLTTIHVFQGTVAYYLLLDNRFRVSSGYLGAEFQETMVGSFSL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1360 379 CDD STKc_AMPK_alpha 17 272 - -
Lal24g1360 379 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Lal24g1360 379 PANTHER SERINE/THREONINE KINASE 9 307 - -
Lal24g1360 379 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 293 333 IPR015940 -
Lal24g1360 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Lal24g1360 379 Gene3D Transferase(Phosphotransferase) domain 1 12 347 - -
Lal24g1360 379 Pfam UBA/TS-N domain 294 323 IPR015940 -
Lal24g1360 379 ProSiteProfiles Protein kinase domain profile. 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1360 379 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 307 - -
Lal24g1360 379 Pfam Protein kinase domain 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1360 379 SUPERFAMILY UBA-like 282 329 IPR009060 GO:0005515
Lal24g1360 379 CDD UBA_SnRK1_plant 294 356 - -
Lal24g1360 379 SUPERFAMILY Protein kinase-like (PK-like) 17 291 IPR011009 -
Lal24g1360 379 SMART serkin_6 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1360 Lal-Chr24 14878754 14883867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1360 20 272 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 2.49e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lal24g1360 Pkinase 4e-81 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1360 K07198 - gmx:100796687 671.003