Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1357 ATGGGTTGTATTAGTTCCAAGAATGTGGTTGCAAGAGATTCTTCACTACCAGTTTTTATTGATGATCATCATAGTATTCCTGGAACCATCATAGAGAGTCATCATTCTCATTCTCATAACCATAATAATCATAGTAATTCTGGGTCAAGGGTTCATTCAGGGTTGGTGGTTTTGTCATCAGAGGAAAAGAAGAAGTTGAAGAAGAATAGTTCAAAGAAAAGTAATGGCTCTTTCAGTTTCAGGATTGGGTTGTTTTCACATCATAGGTATGTGGATGCTGAACAAAATGCTGCTGGGTGGCCACCTTGGTTAACAAATTCTGCTGCTGAAGCTATTCAAGGATGGATCCCTCTCAAAGCTGATTCTTTTCAGAAGTTGGATAAGGTACTTACTAGATGCAATATTGCGGTTGTGGTGACTGCCGCAACTGCATCACACCATAATTGCGGTGTGAACCGAATCACAATGGTGTTGCCAGATTGGGCTTCGGACTGCAATCCACATAGCAATGATGCAATAACCACAATTGCTATTGGACAAGGTACATATAGCAGTGTGTTTCAAGCCCGAGAAGTTGAAAGTGGGAGGATGTTTGCTCTGAAGAAGGTGAGGTTTGACAATTTACAACCCGAGAGCATTAGGTTCATGGCAAGAGAAATAACAATTCTTCGTAGGCTTGATCACCCAAACATCATGAAATTGGAGGGTATAATTACTTCACGACAATCAAACAGCATATACCTTGTATTTGAATACATGGAGCATGATCTTGCCGGTCTAGTTTCACGCCCTGACATCATGTTCACCGACTCTCAGATAAAATGTTACATGAGGCAGCTATTAAGTGGAATCGAGCATTGTCACGTACGTGGTATTATGCATCGAGACATTAAAGTATCAAATATCTTAGTGAATAATGACGGTATTCTCAAGATAGCAGATTTCGGATTAGCAAATACCATTAGCCCAAATAACAAGCACCCTTTAACCAGTCGTGTAGTAACTCTATGGTATCGCCCTCCTGAACTCTTGATGGGATCGACCAATTATGGAGTATCAGTGGATCTGTGGAGTGTAGGCTGTGTATTTGCAGAACTTTATCTCGGGAAGCCTATCCTTAAGGGGAGAACTGAGGTTGAACAACTACACACAATTTTTAAGCTTTGTGGTACTCCACCTGATGAATACTGGAAAAGAATTAAGCTTCCTCGTGCAACAATGTTTAAACCTCAGACTAATTATGAAAGCTCTCTCCGGGAGAGGTGTGCGGATTTTCCTGAAACCGCTGTAAGCCTACTCGAGACTTTTCTGTCCATTGACCCTTACAAGCGTGGTACTGCCTCCTCTGCCCTCATGTCTGAGTATTTCAATACCATGCCATATGCCTGTAGCCCATCAAACCTGCCGAAGTATTCGCCTAGCAAAGAAATGGATGCTAAAAATCGGGGAGTTGCATCCAGGAAAAAGATGGGAAGTAAAATGCGAGAGTCTGCAACATCAAGAAGGCAGCAACGACGAATCTATAAGGTTTCTCAAGAACCGACAAATTTTCATAAAACAGCCTCAAAAGAGGAGATGCAGAACATTCCTGAAAATTCAGACATGGATGATCGTAAAGGACATCTTACTAAGGGAAAAGGAGGAACTACGCACAAAGAGCAACCAAAGCATTCAGTGGATACAATGTCAGAGGCTTCTCAAAATATAAATGTTGCTATTAGTGGTATGGGCTACAGTGTACACTCAGGACAAGTGCAAGCCCCAGAATCTAGTGGTTTTAAATGGGCAAAAAGGCGAAAACCAGATGCTTCGTCCACACTATCCGATGGCGAAAGAAGCAAGATTAGTGCCCTGGATCCAAACTTTGCGAAAGGCACATACGACTTGACCAGGCAAGCGATCTTGGAACGAAAATATAATGAGAATCATGCTCATCGGGATGAGACTTCAAGGCATGTACTACAAAACCACCATGCTCAACATGGTCAACCGAAAGTACAAATGGATTTTGATCCCTCGGAACTGCTAAATCCACAGGGTAACAAAGAATACAGTGGACATTGGAATGAAAATGCTCTGCGGCATGGTATATCAAGGTTTGGAAGAGGTTAG 2112 0.4209 MGCISSKNVVARDSSLPVFIDDHHSIPGTIIESHHSHSHNHNNHSNSGSRVHSGLVVLSSEEKKKLKKNSSKKSNGSFSFRIGLFSHHRYVDAEQNAAGWPPWLTNSAAEAIQGWIPLKADSFQKLDKVLTRCNIAVVVTAATASHHNCGVNRITMVLPDWASDCNPHSNDAITTIAIGQGTYSSVFQAREVESGRMFALKKVRFDNLQPESIRFMAREITILRRLDHPNIMKLEGIITSRQSNSIYLVFEYMEHDLAGLVSRPDIMFTDSQIKCYMRQLLSGIEHCHVRGIMHRDIKVSNILVNNDGILKIADFGLANTISPNNKHPLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELYLGKPILKGRTEVEQLHTIFKLCGTPPDEYWKRIKLPRATMFKPQTNYESSLRERCADFPETAVSLLETFLSIDPYKRGTASSALMSEYFNTMPYACSPSNLPKYSPSKEMDAKNRGVASRKKMGSKMRESATSRRQQRRIYKVSQEPTNFHKTASKEEMQNIPENSDMDDRKGHLTKGKGGTTHKEQPKHSVDTMSEASQNINVAISGMGYSVHSGQVQAPESSGFKWAKRRKPDASSTLSDGERSKISALDPNFAKGTYDLTRQAILERKYNENHAHRDETSRHVLQNHHAQHGQPKVQMDFDPSELLNPQGNKEYSGHWNENALRHGISRFGRG 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1357 703 MobiDBLite consensus disorder prediction 643 703 - -
Lal24g1357 703 MobiDBLite consensus disorder prediction 582 612 - -
Lal24g1357 703 Gene3D Phosphorylase Kinase; domain 1 173 254 - -
Lal24g1357 703 MobiDBLite consensus disorder prediction 593 607 - -
Lal24g1357 703 MobiDBLite consensus disorder prediction 509 528 - -
Lal24g1357 703 MobiDBLite consensus disorder prediction 475 508 - -
Lal24g1357 703 SUPERFAMILY Protein kinase-like (PK-like) 178 461 IPR011009 -
Lal24g1357 703 SMART serkin_6 172 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1357 703 ProSiteProfiles Protein kinase domain profile. 172 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1357 703 MobiDBLite consensus disorder prediction 529 559 - -
Lal24g1357 703 MobiDBLite consensus disorder prediction 30 52 - -
Lal24g1357 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Lal24g1357 703 CDD STKc_CDK9_like 178 456 - -
Lal24g1357 703 PANTHER CELL DIVISION PROTEIN KINASE 177 634 - -
Lal24g1357 703 PANTHER CELL DIVISION PROTEIN KINASE 50 129 - -
Lal24g1357 703 MobiDBLite consensus disorder prediction 471 562 - -
Lal24g1357 703 Gene3D Transferase(Phosphotransferase) domain 1 255 496 - -
Lal24g1357 703 Pfam Protein kinase domain 177 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1357 703 PANTHER CYCLIN-DEPENDENT KINASE 177 634 - -
Lal24g1357 703 PANTHER CYCLIN-DEPENDENT KINASE 50 129 - -
Lal24g1357 703 ProSitePatterns Protein kinases ATP-binding region signature. 178 201 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1357 Lal-Chr24 14839863 14845789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1357 178 503 Core Cell Cycle Gene Families AT5G10270 46.199 3.52e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal24g1357 Pkinase 1.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1357 - - lang:109347355 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1357 24 14839863 14845789 Lal24g1357 24 14839863 14845789 ECH
Lal12g1427 12 17446170 17462613 Lal24g1357 24 14839863 14845789 LSH
Lal13g1791 13 17395078 17399944 Lal24g1357 24 14839863 14845789 LSH