Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1355 ATGGCCCAAACTGACTTCTATACTGTTATGTTTAAAATGTTTGTCTTTGACAAACATTACTACAATGTTCTTGAAGTAAACAAGACAAGCTATGAAAAATGCATAGACAAGAACTTCATAAAAAATGAAACTCAAGGTGGCCATGATGTGGTTGAATTGAAGGAGGCAAAAACATATTATTATATCTCTGGTGGAGGCTATTGTTTTCATCAAATGAAAGTTGCTGTGAATGTTGAAGAACACCAAGCACCAATATTAATAGCACCATCATCACCACTTCCTATGAAATCTAGTTCCATTGTTTTGCCTTCTGTGTTCACATGCACTTTCATCATTCATGCTTATGTGCTTTTCATCATTTTGGTTTCAATTGGTGCTTTCTAA 384 0.3438 MAQTDFYTVMFKMFVFDKHYYNVLEVNKTSYEKCIDKNFIKNETQGGHDVVELKEAKTYYYISGGGYCFHQMKVAVNVEEHQAPILIAPSSPLPMKSSSIVLPSVFTCTFIIHAYVLFIILVSIGAF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1355 127 Pfam Plastocyanin-like domain 13 65 IPR003245 GO:0009055
Lal24g1355 127 Gene3D - 2 86 IPR008972 -
Lal24g1355 127 PANTHER BLUE COPPER PROTEIN 3 110 IPR039391 GO:0009055
Lal24g1355 127 PANTHER EARLY NODULIN-LIKE PROTEIN 20 3 110 - -
Lal24g1355 127 ProSiteProfiles Phytocyanin domain profile. 1 80 IPR003245 GO:0009055
Lal24g1355 127 SUPERFAMILY Cupredoxins 13 78 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1355 Lal-Chr24 14821299 14822333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1355 6 120 Phytocyanin Superfamily AT2G27035 38.462 1.10e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1355 - - gmx:100788336 135.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1789 13 17388119 17389787 Lal24g1355 24 14821299 14822333 LSH