Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1354 ACACAGCACAGAAGAGACATGCAGAAGGTACCAACAATGGTGAAGTTAATTGTAACATGCACTGTGATGCTTCTGATGTTGCCAGAAACCTATGCTACAAGGTGGACTGTAGGAGGCAACATGGGTTGGAACACCAATTTCAACTACACTACTTGGGCTAATACCAAACATTTCTATAAGGATGATTGGCTTTTTTTTGTGTATGATAGGAACCAAATGAATGTACTAGAAGTGAACAAAACAGACTATGAAAGTTGTAACTCTGATCATCCACTTCATAATTGGACAACTGGTGCTGGAAGAGATGTTGTTCCACTTAATGTGACAAGGAACTATTATTTTATTAGTGGCAAAGGTTTCTGCTATGGTGGAATGAAAATAGCTGTTCATGTTGAAAAATTACCACCTCCACCTAAAGCTGCTCCAATAAAATCTGGAACAACAACAACATTAACTGTGTCCTATAAAACCCAGATTGTTCTATTGCCTGTTCTTTTTGCTATTGGAACAGCTTGGGATGCATTTATTCATTTCTGGTGA 540 0.3815 TQHRRDMQKVPTMVKLIVTCTVMLLMLPETYATRWTVGGNMGWNTNFNYTTWANTKHFYKDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCYGGMKIAVHVEKLPPPPKAAPIKSGTTTTLTVSYKTQIVLLPVLFAIGTAWDAFIHFW 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1354 179 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055
Lal24g1354 179 Gene3D - 31 134 IPR008972 -
Lal24g1354 179 PANTHER LAMIN-LIKE PROTEIN 12 171 - -
Lal24g1354 179 PANTHER BLUE COPPER PROTEIN 12 171 IPR039391 GO:0009055
Lal24g1354 179 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
Lal24g1354 179 SUPERFAMILY Cupredoxins 31 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1354 Lal-Chr24 14814382 14817081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1354 7 179 Phytocyanin Superfamily AT5G15350 50.867 4.83e-63 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1354 - - mtr:MTR_6g013420 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1354 24 14814382 14817081 Lal24g1354 24 14814382 14817081 ECH
Lal13g1788 13 17381543 17384040 Lal24g1354 24 14814382 14817081 LSH