Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1345 ATGACTAGTACTCCAAAAGAAGCAGATTTTGCATTGAAAGAAGAAGGTCTAATTACAAGTGATCATGAAAAAGCAAAAGCTTCTGCCTCCTCACAATGGTTAAGATTGAAAGATCCAAGAATCGTTCGAGTATCGCACGCTTTCAGAGGTAAGGACAGGCATAGTAAGGTATGCACAATAAGAGGAGTAAGAGATAGGAGGGTGAGGCTTTCAATCCCCACTGCCATTTACTTATATGATCTTCAACATAGGCTAGGGCTCAATCAACCTAGCAAGGTTTTTGATTGGTTGCTTAATGCAGCTAAGCATGAAATTGATGAACTCCCACCACTACCAACCCCTCCGGGGAATTTCACGCTTTTTTATCCATCTCTCGCTAATTCAAATGAAGTTATCACTTCTCGAAATAATACAAGACAACTCAGTACACCAAACTCCCACCTGAGTACTAATACTCGGGAGGATCGTGAACAAGGAAGCGGTGATTGTGTTGATGTACATGTTTTGCCGAATCATCTCTTATTACCAAGAGCAAATCATCCTTCATTCCTTGGCTTGATGAACACTATGCCACTTGGTGGTTACCAATGGGAGCCTTCAAGTGATGTTCCTCAATTGAGAAACCATGGATTTGAAAACCAAACAGATCATATACATAACATCAATGTTGTACCATTTCCATCAACATTGTCTTTATCAACTACACAGACATATTTCCCAGCTTCACATGTTGCAGCAATGGAGATGGATTTAAAACAAATCAATCATTTTCAGATGCTGAGTTCAAGTTCTCATCAAAATCACTTGATGAATAATTCTCTCAATCCATCTCAACAACACCTCAAAATGGCTCCCAAACTTTTCCATTCATCTAACAGTAGTGAGAGTCAATCACATAATGACAAGGATTTTCCTTCAGAATGA 924 0.3929 MTSTPKEADFALKEEGLITSDHEKAKASASSQWLRLKDPRIVRVSHAFRGKDRHSKVCTIRGVRDRRVRLSIPTAIYLYDLQHRLGLNQPSKVFDWLLNAAKHEIDELPPLPTPPGNFTLFYPSLANSNEVITSRNNTRQLSTPNSHLSTNTREDREQGSGDCVDVHVLPNHLLLPRANHPSFLGLMNTMPLGGYQWEPSSDVPQLRNHGFENQTDHIHNINVVPFPSTLSLSTTQTYFPASHVAAMEMDLKQINHFQMLSSSSHQNHLMNNSLNPSQQHLKMAPKLFHSSNSSESQSHNDKDFPSE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1345 307 MobiDBLite consensus disorder prediction 288 307 - -
Lal24g1345 307 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 302 - -
Lal24g1345 307 MobiDBLite consensus disorder prediction 134 160 - -
Lal24g1345 307 MobiDBLite consensus disorder prediction 134 149 - -
Lal24g1345 307 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 302 IPR005333 GO:0003700
Lal24g1345 307 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Lal24g1345 307 Pfam TCP family transcription factor 50 151 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1345 Lal-Chr24 14735353 14736276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1345 33 293 TCP Transcription Factor Family AT3G02150 41.176 8.30e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal24g1345 TCP 2.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1345 - - gmx:100803100 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1345 24 14735353 14736276 Lal24g1345 24 14735353 14736276 ECH