Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1336 ATGTCTTCATCTTCCACCAATTCCTTTGGTCAAGCCGAGATCAACTGGGACAAGCTAGACAAAACAAAGTTCTATGTCGTGGGAGCTGGACTCTTTACGGGTATTACAGTGGCTCTCTATCCAGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCTTCAAGGGATACTGTGGAGAGAAATGCATTTTCTGTCGTGAAAGGTTTACTTAAAACGGATGGCATCCCTGGTCTGTACAAAGGGTTTGGAACGGTTATCACTGGTGCTGTTCCTGCTAGAATCATATTCCTCACTGCCTTGGAGACGACGAAGGTGGCTGCCTTCAGGATGCTTGAGCCATTTAAACTATCCGAAACTAGCCAGGCTGCCTTAGCAAATGGAGTTGCAGGCATGACATCATCACTTTTTGCACAATCTGTGTTTGTTCCGATTGATGTGGTCAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATACCCAGTATAGTGGGGGTCTGGATGTTGCTCGTAAAGTGATAAAATCTGATGGCATCAGGGGATTATATCGAGGGTTTGGTCTATCTGTTATGACTTATTCCCCTTCTAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATATGGAGATACTTGGGAAATGGTAAGGAAGGTACTCCTAGTGTGCAGAACATTATGTTAGTTCAGGCTGGTGGGGGGATTATTGCTGGCGCAACTGCATCCTGCATTACAACCCCGTTGGATACTATCAAGACACGGTTACAGGTGATGGGACACGAAAAGAGAAGCTCCGTAAAAAAAGTTGTTAAAGACTTAATCAACGAGGATGGTTGGAAAGGTTTATACAGAGGGTTAGGTCCAAGATTTTTTAGCATGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTTAAGCGCTTGTGTGCAAAAGATGAATAA 948 0.4441 MSSSSTNSFGQAEINWDKLDKTKFYVVGAGLFTGITVALYPVSVVKTRLQVASRDTVERNAFSVVKGLLKTDGIPGLYKGFGTVITGAVPARIIFLTALETTKVAAFRMLEPFKLSETSQAALANGVAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHTQYSGGLDVARKVIKSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFIWRYLGNGKEGTPSVQNIMLVQAGGGIIAGATASCITTPLDTIKTRLQVMGHEKRSSVKKVVKDLINEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1336 315 PRINTS Mitochondrial carrier protein signature 37 51 IPR002067 GO:0055085
Lal24g1336 315 PRINTS Mitochondrial carrier protein signature 181 199 IPR002067 GO:0055085
Lal24g1336 315 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Lal24g1336 315 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 11 315 - -
Lal24g1336 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 21 105 IPR018108 -
Lal24g1336 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 310 IPR018108 -
Lal24g1336 315 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 315 - -
Lal24g1336 315 Pfam Mitochondrial carrier protein 29 104 IPR018108 -
Lal24g1336 315 Pfam Mitochondrial carrier protein 233 314 IPR018108 -
Lal24g1336 315 Pfam Mitochondrial carrier protein 122 211 IPR018108 -
Lal24g1336 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 208 IPR018108 -
Lal24g1336 315 SUPERFAMILY Mitochondrial carrier 17 307 IPR023395 -
Lal24g1336 315 Gene3D Mitochondrial carrier domain 26 315 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1336 Lal-Chr24 14688456 14693966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1336 14 315 Chloroplast and Mitochondria Gene Families AT5G15640 76.547 1.90e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1336 K15121 - gmx:100781796 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1336 24 14688456 14693966 Lal24g1336 24 14688456 14693966 ECH
Lal24g1336 24 14688456 14693966 Lal22g1277 22 15363287 15372899 PCT
Lal22g1277 22 15363287 15372899 Lal24g1336 24 14688456 14693966 PCT