Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1328 ATGAGACATGTTATCTCAGCTCTTTGTGTTCTTCTGCTATTCACTTATGCTTGTGCTTATGATCCTTTGGATCCAACAGGAAACATTACAATCAAATGGGATGTCATGTCTTGGACCGCAGATGGCTATGTTGCTACGGTGACAGTATACAACTTCCAAATGTTTCGGCACATTATTCAGCCCGGATGGACATTAGGATGGACATGGGCAAAGAAAGAAGTTATATGGTCAGTGGTAGGATCTCAAACCACAGAACAAGGGGATTGTTCAAAGTTCAAAGGAAACATACCTCATTGCTGCAAGAAAACTCCTACAGTAGTAGATTTGCTCCCTGGTGTACCTTACAATCAACAATTCACTAACTGCTGTAAGGGTGGAGTAGTAGCAGCATGGGGCCAAGATCCTTCACAAGCTATCTCATCTTTTCAATTGAGTGTTGGCCAAGCTGGTACCTCAAATAAGACAGTTAAACTTCCCAAGAATTTCACTCTCTTGGCTCCGGGACCGGGCTATACTTGTGGCCCTGCAAAGATTGTTCCCTCCACCAATTTTCTTACTCCCGACAAGCGCCGTAAGACTCAAGCATTAATGACATGGAATGTGACCTGCACATACTCACAATTTCTGGCAAGAAAGAACCCAAGTTGTTGTGTATCATTGTCATCCTTCTATAATGATACCATTACCCCTTGTCCCTCTTGTGCCTGTGGCTGCCAGAACAAGAAGACTTGTGTGAAGAGTGACTCAAAAATTCTCAGCATGGTGGGGGTTCACACTCCAAAGAAAGACAATGAACCAATGCTGCAATGTACTCATCATATGTGCCCAATAAGGGTCCATTGGCATGTGAAACAAAACTATAAGGACTATTGGAGAGTGAAGATTGCCATAACAAATTTCAATTACAGGATGAATTACTCTCTATGGGCTCTTGCTATTCAGCATCCAAATCTAAACAATGTCACTCAAGTCTTCAGCTTTGACTACAAGCCTTTGGTTCCTTATGAATCCATAAATGACACTGGTATGTTCTTTGGCATGAAATACTTCAATGATCTATTAATGGAAGCTGGACCAACTGGTAATGTTCAATCAGAGGTGCTTCTTCAGAAGAACATGGATACATTCACATTCAAGCAAGGTTGGGCATTTCCTCACAAAGTCTACTTTAATGGTGATGAATGCATGTTGCCACCACCAGATACCTACCCTTTTCTCCCTAATTCTGCACCTACAAGCCTACTTACATTACCAGCATTCATCTTCTCTTTGATTTTCTTCTTAGCAGTTTGGTGA 1296 0.4182 MRHVISALCVLLLFTYACAYDPLDPTGNITIKWDVMSWTADGYVATVTVYNFQMFRHIIQPGWTLGWTWAKKEVIWSVVGSQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSQAISSFQLSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTNFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNDTITPCPSCACGCQNKKTCVKSDSKILSMVGVHTPKKDNEPMLQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWALAIQHPNLNNVTQVFSFDYKPLVPYESINDTGMFFGMKYFNDLLMEAGPTGNVQSEVLLQKNMDTFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSAPTSLLTLPAFIFSLIFFLAVW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1328 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
Lal24g1328 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Lal24g1328 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Lal24g1328 431 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lal24g1328 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1328 Lal-Chr24 14587551 14590481 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1328 19 430 COBRA Gene Family AT3G29810 68.434 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1328 - - gmx:100798678 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1328 24 14587551 14590481 Lal24g1328 24 14587551 14590481 ECH
Lal24g1328 24 14587551 14590481 Lal6g1582 6 18323429 18335001 ECH
Lal13g1753 13 17082923 17085752 Lal24g1328 24 14587551 14590481 LSH
Lal24g1328 24 14587551 14590481 Lal6g1582 6 18323429 18335001 PCT
Lal22g1278 22 15447454 15452198 Lal24g1328 24 14587551 14590481 PCT