Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1325 ATGAACTTGCAAGTTGATTTAATTATCATTGGTATCAGTGCTGGTTTGGCCCTTGGAATTCTGATCTCTTGCCTCGTATTTTACGGTATAAGGTGGTACAAGAAGTGCTCTAATATTACACAATCTGAAAGTGAGACTCCTACAACAACTCTTCCGATACGAACAAATGGATTGGACACGAGCACTGACTTCAGTGCATCCATTACTAATTCCATATCCATGCCAGAAAATGTAAAAAAAAAATTCCCTTTCAGCTGGTGGAGTCGTCAAAGCACAGATCACTTTGCTTCGCCATCGGGCATTCTTACGTACTCATACAAAGAAATTCAAAGGGCCACACAAAATTTCACAACTACCTTGGGACAAGGATCATTTGGAACAGTTTATAAAGCAACAATGGCTACCGGGGAGGTCGTAGCAGTGAAGGTGCTTGCAACCAATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTGCTTCTGCTAGGAAGACTGCATCATCGGAATCTCGTGAATTTGATTGGATATTGTGTAGATAAAGGACAGTGCATACTGGTTTACCAGTTCATGAGTAACGGGAGTTTACAAAATCTTCTATATGGTGAAGAAAAGAACTTGAGTTGGGATGAAAGGTTGCAAATTGCCCTTGATATTTCACATGGAATAGAATACCTTCATGAAGGAGCTGTCCCACCCGTCATACATCGTGATCTGAAGTCTGCCAATATATTGCTAGATAACTCAATGAGAGCTAAGGTTGCTGATTTTGGTCTCTCAAAGGAAGAGATATTTGATGGCCAGAATTCTGCCCTTAAAGGTACATATGGCTACATCGATCCGGCGTACGTTTCCACAAGCAAGTTAACAATGAAGAGTGATATCTACAGTTTCGGTATCATAATTTTCGAGCTCATCACTGCGATCCACCCACATCAAAATCTGTTGGAATATGTTAGCCTTGCTGCAATGGATCATGATGGCATAGATGGGATACTTGACAAGCAACTTGTGGAAAAATGCGACATCGAAGAAGTGAGACAGCTAGCTATAATTGCACATAAATGCTTGCACAAATTGCCGAAGAAACGCCCTTCGATAGGCGAAGTTTCACAGGTAATGTCAAGGATAAAGCATAGGCGGCAGCACGGTCGGAAAGAGAACATGTCATTTAGAAGCGGTACCTTATCCAGAGGTTTGAGTCAGTTAGAAGATCAACATGGTGAATTAAATAGGACAGCTTCTATGAACCACAATCAAAATGGATGA 1266 0.4131 MNLQVDLIIIGISAGLALGILISCLVFYGIRWYKKCSNITQSESETPTTTLPIRTNGLDTSTDFSASITNSISMPENVKKKFPFSWWSRQSTDHFASPSGILTYSYKEIQRATQNFTTTLGQGSFGTVYKATMATGEVVAVKVLATNSKQGEKEFQTEVLLLGRLHHRNLVNLIGYCVDKGQCILVYQFMSNGSLQNLLYGEEKNLSWDERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDNSMRAKVADFGLSKEEIFDGQNSALKGTYGYIDPAYVSTSKLTMKSDIYSFGIIIFELITAIHPHQNLLEYVSLAAMDHDGIDGILDKQLVEKCDIEEVRQLAIIAHKCLHKLPKKRPSIGEVSQVMSRIKHRRQHGRKENMSFRSGTLSRGLSQLEDQHGELNRTASMNHNQNG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1325 421 SMART serkin_6 114 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1325 421 SUPERFAMILY Protein kinase-like (PK-like) 94 372 IPR011009 -
Lal24g1325 421 PANTHER OS01G0750732 PROTEIN 9 418 - -
Lal24g1325 421 ProSitePatterns Protein kinases ATP-binding region signature. 120 142 IPR017441 GO:0005524
Lal24g1325 421 ProSiteProfiles Protein kinase domain profile. 114 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1325 421 Gene3D Transferase(Phosphotransferase) domain 1 190 396 - -
Lal24g1325 421 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 418 - -
Lal24g1325 421 CDD STKc_IRAK 120 376 - -
Lal24g1325 421 Gene3D Phosphorylase Kinase; domain 1 81 189 - -
Lal24g1325 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Lal24g1325 421 Pfam Protein kinase domain 118 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1325 Lal-Chr24 14576010 14580732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1325 90 373 Receptor kinase-like Gene Family AT3G19300 41.297 6.76e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lal24g1325 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1325 - - adu:107471361 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1325 24 14576010 14580732 Lal24g1325 24 14576010 14580732 ECH
Lal13g1658 13 16348070 16349761 Lal24g1325 24 14576010 14580732 LSH