Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1319 ATGGAAGGCACAAAGGTTACAAGACTCAATCATTTACTCCCTTCTCCATACTCTACAAACTACAACACAACTCAGAACAACAACATTCCAAAATTTCAATATCAAACACTCCCTAACCAATTATATGGCTTCCACAACAACCCTTTTCAAGTTCATGATAACTTTAGTCCTCAATCATCAGGTATCAGCAGCAACTCCACCTCTGATGAAGCAGATGAGCAAAACATGAGTCTCATCATCAATGAGAGGAAACACAGAAGGATGATATCGAATCGAGAATCTGCGCGGCGATCACGAATGAGGAAGCAAAAACAACTTGATGAGCTATGGTCACAGGTCATGTGGCTTAGGAATGAGAATCACCAAGTATTAGACAAGCTGAACCATTTATTAGAGTGTCATGATCAAGCACTTCAAGAAAATGCTAAGCTCAAAGAACAAACTTCAGAACTTCACCAAATGATAAGGGACATGCAGATACATAGCCCTTGTCCTTCTTTTGGACCCTTTGAAGATGTTGTTCCTTGTGAATCATCATATCTCATAATATCTGATTCCTCAAACAAATCCATCTCAAATTCTATGGACTTTCTTGGTTAA 600 0.3883 MEGTKVTRLNHLLPSPYSTNYNTTQNNNIPKFQYQTLPNQLYGFHNNPFQVHDNFSPQSSGISSNSTSDEADEQNMSLIINERKHRRMISNRESARRSRMRKQKQLDELWSQVMWLRNENHQVLDKLNHLLECHDQALQENAKLKEQTSELHQMIRDMQIHSPCPSFGPFEDVVPCESSYLIISDSSNKSISNSMDFLG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1319 199 PANTHER BZIP TRANSCRIPTION FACTOR 1 199 - -
Lal24g1319 199 Gene3D - 81 136 - -
Lal24g1319 199 Coils Coil 127 154 - -
Lal24g1319 199 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 130 IPR004827 GO:0003700|GO:0006355
Lal24g1319 199 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Lal24g1319 199 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
Lal24g1319 199 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Lal24g1319 199 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Lal24g1319 199 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 199 IPR044521 -
Lal24g1319 199 SUPERFAMILY Leucine zipper domain 83 132 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1319 Lal-Chr24 14528503 14529102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1319 12 177 bZIP Transcription Factor Family AT3G30530 57.738 1.20e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal24g1319 bZIP_1 6.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1319 - - lang:109335342 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1319 24 14528503 14529102 Lal24g1319 24 14528503 14529102 ECH
Lal13g1745 13 17018270 17018803 Lal24g1319 24 14528503 14529102 LSH
Lal24g1319 24 14528503 14529102 Lal6g0747 6 4954092 4954688 PCT
Lal6g0747 6 4954092 4954688 Lal24g1319 24 14528503 14529102 PCT