Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1252 ATGAAACTACATGCAAGCATTTCTGAGCAAGAATCTCCTATGAATTCTGAGAAAGTTAAAAGCCTTTTGGCTAACCTATCAAATTTGTGCACCCTCCTCCCTTCAACCATTGACATTAAAGCCTTTCCAGAAGAGGTGTTGAACATTCGTGAGAGCCTCAATAACTTTGTTAGCGAAGCTGAAGGGCTTTTAGAGCTTGAATTCTCAACTTTCATTGCCCACAAACCCAAACCCTTGCAATATCTTACACAATACTGTTACTATGCGAACTATGTTAGAATAGCAAGCATAGAGAGCAAAATCCTCAAAGAAAATGGCATGGAAAATGCAAAAAGAGTGGCTTTTGTGGGGTCAGGTGCAATGCCACTCTCTTCCATTCTAATGGCTACACATCACATGGAATCCACACACTTTGATAACTTTGACATTGATGATAAGGCAAATGAGGTGGCTCGCAGAATTGTTGCTTCAGATGCTGAACTTGAGAAACGGATGAAGTTTGAGACACAAGATATTATGGAAGTAAAAGAGAAGTTAGGGCAATATGATTGCATATTTTTGGCAGCACTTGTGGGTATGAATAGAGAAGAAAAAGTGAAGATTCTGGGACACATAAGAATGTATATGAAGGAGGAAGGTCTTTTGGTTGTGAGAAGTGCAAAAGGAGCTAGAACTTTCATATACCCTTCTGTTGAGGATTGTGACTTTGTTGATTTTGAACTGCTTGCAACCTTTCAACCCAAACATGCTTTGGTCCATTCAGTTATTCGAAAGAAGCCTAAAACATAG 789 0.3929 MKLHASISEQESPMNSEKVKSLLANLSNLCTLLPSTIDIKAFPEEVLNIRESLNNFVSEAEGLLELEFSTFIAHKPKPLQYLTQYCYYANYVRIASIESKILKENGMENAKRVAFVGSGAMPLSSILMATHHMESTHFDNFDIDDKANEVARRIVASDAELEKRMKFETQDIMEVKEKLGQYDCIFLAALVGMNREEKVKILGHIRMYMKEEGLLVVRSAKGARTFIYPSVEDCDFVDFELLATFQPKHALVHSVIRKKPKT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1252 262 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 262 IPR004298 GO:0030410|GO:0030418
Lal24g1252 262 PANTHER NICOTIANAMINE SYNTHASE 3 1 257 IPR004298 GO:0030410|GO:0030418
Lal24g1252 262 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 100 219 IPR029063 -
Lal24g1252 262 Coils Coil 158 178 - -
Lal24g1252 262 Pfam Nicotianamine synthase protein 1 258 IPR004298 GO:0030410|GO:0030418
Lal24g1252 262 PANTHER NICOTIANAMINE SYNTHASE 1 257 - -
Lal24g1252 262 CDD AdoMet_MTases 141 217 - -
Lal24g1252 262 Gene3D Vaccinia Virus protein VP39 2 260 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1252 Lal-Chr24 13812990 13813778 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1252 3 259 Nicotianamine Synthase Gene Family AT1G09240 41.538 3.02e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1252 K05953 - gmx:100775553 341.658