Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1250 ATGGATTCTATGCAAAGCTTAGACTTTTTTGCAGAAATATCACCAGAGATCTTCATAGAGGAGATCATGAAACTTCATGCAAGAATTTCCAATCTAGAATCTCTTAGGAATTCTGAGGAAGTTAACAAACTTTTGGGTACCCTAGCAAAATTGTGCTCCCTCCTTCCTTCAACCACTGACATTAAACACTTTCCCAAAGAAGTGCTGAACATTCGTGAGAGCCTCAATAACTTTGCTGGCCAAGCTGAAGGGCTTTTAGAGCTTGAATCCTCAACTCTTATTAGCCTCAAACCTAAACCCTTGGACAGTGTTACAGAATACCCTTACTATGCCAACTATGTTAGAATAGCAAGCATGGAGAGCAAAATCCTCAAAGCAAATGGCATGGAAAATGCAAAGAAGGTAGCTTTTGTGGGGTCTGGTGCAATGCCACTCTCTTCCATTCTGATGGCTTCAAATCACATGGAATCCACACACTTTGATAACTTTGATATTAATGATAAGGCAAATGAGGTAGCTTTTGTGGGGTCTGGTGCAATGCCACTCTCTTCCATTCTGATGGCTTCAAATCACATGGAATCCACACACTTTGATAACTTTGATATTAATGATAAGGCAAATGAGGTAGCTCGTAGAATTGTTGCTTCAGATGCTGAACTTGAGAAGCGGATGAAGTTTGAGACACGAGATATTATGGAAGTAAAAGAGAGGCTAGGGCAATATGACTGCATCATTTTGGCAGCACTAGTGGGTGTGAACAGAAAAGATAAGTTGAAGATTCTGGAACACATAAGAATGTATATGAAAGAAGGAGGTTTTTTGGTTGTGAGAAGTGCAAAAGGAGCTAGAACTTTCATTTACCCTTGTGTTGAGGATCGTGACTTGGTTAACTTTGAACTACTTACAACCTTTCAACCTACACATGCTTTGGTCCACTCAGTTCTTCTTCGCAAGAAGACTAAAGCATAA 969 0.3994 MDSMQSLDFFAEISPEIFIEEIMKLHARISNLESLRNSEEVNKLLGTLAKLCSLLPSTTDIKHFPKEVLNIRESLNNFAGQAEGLLELESSTLISLKPKPLDSVTEYPYYANYVRIASMESKILKANGMENAKKVAFVGSGAMPLSSILMASNHMESTHFDNFDINDKANEVAFVGSGAMPLSSILMASNHMESTHFDNFDINDKANEVARRIVASDAELEKRMKFETRDIMEVKERLGQYDCIILAALVGVNRKDKLKILEHIRMYMKEGGFLVVRSAKGARTFIYPCVEDRDLVNFELLTTFQPTHALVHSVLLRKKTKA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1250 322 PANTHER NICOTIANAMINE SYNTHASE 3 171 321 IPR004298 GO:0030410|GO:0030418
Lal24g1250 322 PANTHER NICOTIANAMINE SYNTHASE 3 2 173 IPR004298 GO:0030410|GO:0030418
Lal24g1250 322 Pfam Nicotianamine synthase protein 170 321 IPR004298 GO:0030410|GO:0030418
Lal24g1250 322 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 322 IPR004298 GO:0030410|GO:0030418
Lal24g1250 322 PANTHER NICOTIANAMINE SYNTHASE 171 321 - -
Lal24g1250 322 PANTHER NICOTIANAMINE SYNTHASE 2 173 - -
Lal24g1250 322 CDD AdoMet_MTases 174 276 - -
Lal24g1250 322 Gene3D Vaccinia Virus protein VP39 13 170 IPR029063 -
Lal24g1250 322 Gene3D Vaccinia Virus protein VP39 171 321 IPR029063 -
Lal24g1250 322 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 184 277 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1250 Lal-Chr24 13800626 13811278 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1250 16 319 Nicotianamine Synthase Gene Family AT1G09240 37.705 8.02e-63 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1250 K05953 - gmx:100775553 340.502