Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1248 ATGGATTCTTTCCAAAGCTTCAACTTTTACACCGAAATTTCAACAGAGATCTTCATTGACCAGATCATGAAACTTCATGCAAGCATTTCTAAGCTAGAATCTTTTAGGATTTGTGAGGAAGTTAAAAGCCTTATGGGTAACCTAGCAAATTTGTGCACCCTCCTCCCTTCAACCATTGACATTAAAGCCTTTCCAGAAGAGGTGTTGAACATTCGTGAGAGCCTCAATAACTTTGTTAGCGAAGCTGAAGGGCTTTTAGAGCTTGAATTCTCATCTCTCATTAGCTACAAACCCAAACCCTTGCAATATCTTACACAATACTCTTACTATGCTCACTACGTTAGAATAACAAGCATAGAGAGCAAAATCCTCAAAGAAAATGGCATTGAAAATGCAAAAAGAGTAGCATTTGTGGGGTCAGGTGCAATGCCACTCTCTTCCATTCTAATGGCTACAAATCACATGGAATCCACACACTTTGATAACTTTGACATTGATGATAAGGCTAATGAGGTGGCTCGCAGAATTGTTGCTTCAGATGCTGAACTTGAGAAACGGATGAAGTTTGAGACACAAAATATTATGGAAGTAAAAGAGAGGTTAGGGCAATATGATTGCATCATTTTGGCAGCACTTGTGGGTATGAATAGAGAAGAAAAAGTGAAGATTATAGGACATATAAGAATGTATATGAAGGAGGAAGGTTTTTTGGTTGTGAGAAGTGCAAAAGGAGCTAGAACTTTCATATACCCTTTTGTTGAGGATCGTGACTTTGTTGATTTTGAACTGCTTGCAACATTTCAACCCAGACATGCTTTGGTCCATTCAGTTCTTCGCAAGAAGCCTAAAGCAAAGCATCAGAAATCACAAATGTAG 876 0.3847 MDSFQSFNFYTEISTEIFIDQIMKLHASISKLESFRICEEVKSLMGNLANLCTLLPSTIDIKAFPEEVLNIRESLNNFVSEAEGLLELEFSSLISYKPKPLQYLTQYSYYAHYVRITSIESKILKENGIENAKRVAFVGSGAMPLSSILMATNHMESTHFDNFDIDDKANEVARRIVASDAELEKRMKFETQNIMEVKERLGQYDCIILAALVGMNREEKVKIIGHIRMYMKEEGFLVVRSAKGARTFIYPFVEDRDFVDFELLATFQPRHALVHSVLRKKPKAKHQKSQM 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1248 291 CDD AdoMet_MTases 163 239 - -
Lal24g1248 291 Gene3D Vaccinia Virus protein VP39 13 282 IPR029063 -
Lal24g1248 291 Coils Coil 180 200 - -
Lal24g1248 291 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Lal24g1248 291 Pfam Nicotianamine synthase protein 15 281 IPR004298 GO:0030410|GO:0030418
Lal24g1248 291 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Lal24g1248 291 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 242 IPR029063 -
Lal24g1248 291 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 287 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1248 Lal-Chr24 13787900 13788775 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1248 18 278 Nicotianamine Synthase Gene Family AT1G56430 39.924 1.40e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1248 K05953 - gmx:100819726 360.147