Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1245 ATGGGGTCTCAAGATGAGTCAATTCAAGAGCCAAAGGTGCAGCCTTTGGCTAGGGAAGGGTCATTGTATAATCTCACCCTTGATGAGGTGCAGAACCAGCTTGGGAATTTTGGGAAACCACTTGGAAGCATGAATCTTGATGAGTTGCTCAAGAATCTGTGGAGTGCTGAAGGTTGTAGTGAAGTGGGTTATGGGTTGGATTTTGGTGGTGATGAGAATAACATGCAGCAGCATAGTGAGCTTGTTTCTGGGTCCTCTTTGAACCCACAGGGTAGCCTAACATTGTTTGGAGATATTTGCAAGAAAACTGTTGATGAGGTTTGGAGAGATATGCAGATGAAAAGGGGCACTTGTAGGGATAGAAAATCTCCGGAAAGACAGCCTACACTCGGCGAGATGACCTTGGAGGACTTCTTGGTGAAGGCCGGTGTGGTTACTGATTCTTTTCCTACCAAGGACGATGGTGATGGTATTTCAGGGATTGATTCAAATGTGGCATCCGAAAAAAATGTTTCGCAACATGGTCATTGGATGCAATACCAACAACAACAGTGTCAAAGTCAGCAAGATGTTATGATGGTTGGTTTTGTGGCTGGCAATGATATTCAACAGCCTTTCCAGGTTGCGGTAAATCCAATTTTGGATGCAGCATACTCTGAAACAATGATGAAAATGTCGCCATCTTCTTTAATAGGTACACAAACTCTGGGTCGGAAAAGGGTTGCTTCCGATAATGTAGTGGTAGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGGTCAAGATCAAGAAAACAGGCTTACACACAAGAACTCGAGATTAAAGTTTCACATTTGGAAGAGGAGAATGAAAAGCTTAGAAGACAGTGTGAGATTATGAAGGTACTGCCGTGTGCACCACCACCGGACCCTAAGCATCAGCTTCGCAGAACTGGTTCAACGACCTTTTGA 975 0.4421 MGSQDESIQEPKVQPLAREGSLYNLTLDEVQNQLGNFGKPLGSMNLDELLKNLWSAEGCSEVGYGLDFGGDENNMQQHSELVSGSSLNPQGSLTLFGDICKKTVDEVWRDMQMKRGTCRDRKSPERQPTLGEMTLEDFLVKAGVVTDSFPTKDDGDGISGIDSNVASEKNVSQHGHWMQYQQQQCQSQQDVMMVGFVAGNDIQQPFQVAVNPILDAAYSETMMKMSPSSLIGTQTLGRKRVASDNVVVEKTVERRQKRMIKNRESAARSRSRKQAYTQELEIKVSHLEEENEKLRRQCEIMKVLPCAPPPDPKHQLRRTGSTTF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1245 324 CDD bZIP_plant_BZIP46 254 308 - -
Lal24g1245 324 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 322 IPR043452 GO:0003700|GO:0045893
Lal24g1245 324 Coils Coil 277 304 - -
Lal24g1245 324 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 302 IPR004827 GO:0003700|GO:0006355
Lal24g1245 324 Pfam bZIP transcription factor 254 299 IPR004827 GO:0003700|GO:0006355
Lal24g1245 324 SMART brlzneu 250 307 IPR004827 GO:0003700|GO:0006355
Lal24g1245 324 Gene3D - 252 306 - -
Lal24g1245 324 PANTHER BZIP TRANSCRIPTION FACTOR 2 322 - -
Lal24g1245 324 SUPERFAMILY Leucine zipper domain 254 301 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1245 Lal-Chr24 13751364 13754463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1245 1 324 bZIP Transcription Factor Family AT3G56850 50.904 5.38e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal24g1245 bZIP_1 4.3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1245 K14432 - gmx:100170741 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1642 13 16197544 16202489 Lal24g1245 24 13751364 13754463 LSH