Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1237 ATGGTAACTAGATTATATCCTTCAATGCTTCTAGTTTTGGTTACAATTACACTTTCCATATATCATTCACAACAACTTCAATCCTCAAAATCTGAGTCTCATACCCTTTTAAGAATTCAACAGCAATTGAATTTCCCTTCTGTTCTAAGAAGCTGGAATAACAACATAGACTTTTGTAACACAAATTCCAAATCATATCTTACTATTGTATGCTATGAGGATACAATAACTCAGCTGAATATTGTAGGTGAAATAAGAACTCCACTTCTTTCTAAAAACTTCTCAATAGATAATTTTATCACAACCCTTGTAAGGCTTCCTAGTCTAAAAGTCCTTACATTGGTTTCTCTGGGTATATGGGGTCCATTGCCGGGTAAAATCGCTCGGTTATCGTCGCTGGAAATAGTTAATGTGAGTTCAAATTTTCTGTATGGTAGCATCCCTCAAGAGTTTTCATCATTGCTGCATCTTCAAACCCTCATTCTAGATGATAACATGTTTGCTGGCCATCTTTCTCACTGGCTGGATTCGTTTCCGGCCTTAACCGTGTTAAGTTTGAAAAACAATTTGTTCAATGGTACTCTTCCGAGTTCGCTTGGTAGATTGGAGAATCTGAGAATACTATCACTTTCTCATAATCATTTTTATGGATCAGTACCTGATTTGAGCCATTTGACAAATCTTCAAGTGCTTGAATTGGATGATAATGCTTTCGGACCGCAGTTTCCTCGGCTCGGTAACAAGTTGGTTACTCTAGTACTAAGAAATAATAAGTTCAGATCTGGTATCCCTGATGAAATGAGTTCATATTATCAGCTTGAGAGGTTTGATATCTCATCAAATGCATTTGTTGGGCCACTCCAGTTAGCACTTTTATCACTTCCTTCTATTACTTATCTCAACATTTCTAGAAACAAACTATCCGGGATGCTTTTCGAGAATCTGTCTTGCAGTTCCAGACTCGAAGAAGCCGATTTATCCTCAAATCTTTTGACGGGTAACTTACCGAAATGTCTATCGTCAAATTCAAATGATCGGAATGTTCTGTATGCTAAAAATTGTCTAGAGGAAACTGATCAAAATCAACATGCACTACCCTTTTGCCACACTGAAGCAATAGCTGTGGGAATATTACCAGAGAGAAAGAAATACAAACATGCATCTAAGGCAACAATTACCATTGGTATAGTATGTGGAACTTTTGCAGGAGTAGCACTGGCTATGCTTCTTTTCTTTATCATTAGAAGAGTAAATTCCAAAAGCAAAATGAAGAATCCTCCAACAAAGTTAATATCAGAGAATGCAACTTCTGGATACACCTCTAAGTTACTCTCTGATGCAAGGTACATATCTCAAGTTTCTCAACCAATGAATTTTGGAGCAGTTGGCCTGCCACCATACCGAACTTTCTCGTTGGAAGAGATCGAGGCGGCTACAAATAATTTCGACACATCTTCTTTTATGGGTGAAGGTTCTAAAGGGCAGATGTATAGAGGTCAGCTGAGGGATGGTTCACTTGTTGCCATTAGATGTCTTAAAATGGTGAAAAGCCACAGAACTGAAGACTTTATGCACCAAATCGAGCTGATATCGAAACATAGACATCGACATTTAGTCAGCGCTCTTGGATACTGCTTCGAATGTTACTTAGATGACTCAAGTGTCAGCAGATTATTTCTTGTATTTGAATATGTACCAAATGGCACACTCAAGAGTTGGATCTCAGATGGGCATTACAGAAAATCCCTGAGTTGGACTCAACGGATCGCAGCCGCAATCGGCGTAGCAAAGGGCATCCATTTTTTGCATACAGGGATTGTCCCTGCTGTATATTCAAACAATCTCAAGATAACAGATGTTTTACTGGATCAGAATTTTGTTGCAAAAATAAGTACTTATAACTTACCTTTGTTATCTAACATGGGAAAGGTTGAGAGTGGAAATCCTTCCAGTGGATTCAAAGGTCCTTGCAATAACAAAAGCATCAAAGAGGGTGAATCTCAACGCAACTGTAAGGTTGCTTACCTTGTGACCGAGAGGTCTGTAACACATGAAGATAAGTGTGACATATATGACTTTGGAGTAATACTAATGGAACTCATTCTAGGAAGGACAATAAAGCCAAGAAATGTAGACACTTTAAAGGATCTGTTGCAAGCAAGTATAAGAGGTGATGATGAAGCTAAAAGGAGCATTATAGATCCAGCAATTAGAAATGCATGCATGGATCAATCATTGAAGACAATGATGGAGATTTGTGTAAGGTGTTTGGTTAAAGAGAAAGAAGAAAATCCTTGTTTAGAAGATATTTTGTGGAATTTGCAATTTGCTGCTCAAGTTCAAGATGCATGGAGATGTGACTCTCAAATAAGTAGTGAAGGGTCTCCCATCTCACCTTTACCATCTAGACCAATGACCTTCCAATAG 2427 0.3811 MVTRLYPSMLLVLVTITLSIYHSQQLQSSKSESHTLLRIQQQLNFPSVLRSWNNNIDFCNTNSKSYLTIVCYEDTITQLNIVGEIRTPLLSKNFSIDNFITTLVRLPSLKVLTLVSLGIWGPLPGKIARLSSLEIVNVSSNFLYGSIPQEFSSLLHLQTLILDDNMFAGHLSHWLDSFPALTVLSLKNNLFNGTLPSSLGRLENLRILSLSHNHFYGSVPDLSHLTNLQVLELDDNAFGPQFPRLGNKLVTLVLRNNKFRSGIPDEMSSYYQLERFDISSNAFVGPLQLALLSLPSITYLNISRNKLSGMLFENLSCSSRLEEADLSSNLLTGNLPKCLSSNSNDRNVLYAKNCLEETDQNQHALPFCHTEAIAVGILPERKKYKHASKATITIGIVCGTFAGVALAMLLFFIIRRVNSKSKMKNPPTKLISENATSGYTSKLLSDARYISQVSQPMNFGAVGLPPYRTFSLEEIEAATNNFDTSSFMGEGSKGQMYRGQLRDGSLVAIRCLKMVKSHRTEDFMHQIELISKHRHRHLVSALGYCFECYLDDSSVSRLFLVFEYVPNGTLKSWISDGHYRKSLSWTQRIAAAIGVAKGIHFLHTGIVPAVYSNNLKITDVLLDQNFVAKISTYNLPLLSNMGKVESGNPSSGFKGPCNNKSIKEGESQRNCKVAYLVTERSVTHEDKCDIYDFGVILMELILGRTIKPRNVDTLKDLLQASIRGDDEAKRSIIDPAIRNACMDQSLKTMMEICVRCLVKEKEENPCLEDILWNLQFAAQVQDAWRCDSQISSEGSPISPLPSRPMTFQ 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1237 808 SUPERFAMILY Protein kinase-like (PK-like) 462 776 IPR011009 -
Lal24g1237 808 Gene3D Ribonuclease Inhibitor 28 243 IPR032675 -
Lal24g1237 808 SUPERFAMILY L domain-like 36 355 - -
Lal24g1237 808 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 9 796 - -
Lal24g1237 808 Gene3D Ribonuclease Inhibitor 244 362 IPR032675 -
Lal24g1237 808 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 796 - -
Lal24g1237 808 Gene3D Phosphorylase Kinase; domain 1 457 564 - -
Lal24g1237 808 Gene3D Transferase(Phosphotransferase) domain 1 565 791 - -
Lal24g1237 808 ProSiteProfiles Protein kinase domain profile. 482 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1237 808 Pfam Leucine rich repeat N-terminal domain 30 60 IPR013210 -
Lal24g1237 808 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Lal24g1237 808 Pfam Protein tyrosine and serine/threonine kinase 486 771 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1237 Lal-Chr24 13653371 13658476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1237 45 803 Miscellaneous Gene Families AT3G03770 59.688 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lal24g1237 PK_Tyr_Ser-Thr 2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1237 - - gmx:100813207 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1237 24 13653371 13658476 Lal24g1237 24 13653371 13658476 ECH