Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1222 ATGGAAGAAGCAATTGTGGTGAACAAAGGAGAAGAATCTCTAGGGTTGCCTCCAGGTTTCAGGTTCCAACCAACTGATGAAGAAATCATCACTTGTTATCTCACACAGAAAGTGTTAAATAGTAGTTTTAGTGCAATTGCTATGGGTGAAGCTGATTTCAACAAGTGTGAGCCTTGGGACTTGCCTAAGAAAGCGAAGATGGGGGAGAAAGATAATTGGTACTTCTTTTGCCAAAGAGATAGGAAGTATCCAACAGGAATGAGAACAAATCGTGCTACACAATCAGGGTATTGGAAGGCCACAGGAAAAGATAAAGAAATTTACAAAGGGAAAGGGAACTTAGTAGGAATGAAGAAGACCCTTGTATTCTATAGAGGAAGAGCTCCAAAGGGAGAGAAAACTAATTGGGTTATGCATGAATTTAGATTGGAAGGAAAATATGCAAATTATAATCTTCCTAAGGTTACAAAGAATGAATGGGTTGTCTCAAGGGTTTTTCATAAGAACATAGATATTAGAAAGATCCCACTTTTTAAGAATAACTCAATTGAGAATGATCTTCTTGATTTTTCTTCAATACATCAACCTCTCATGGATCCTCCTTATGGCACTAACCAACCCTCTTCATCATCAAATAGCTTCTACTATTCTCCCAACCTATTCATCAACAACAATCAAAACCAGAATATGCTTATGAAACTAGAAGAACATAGAACCTATGAGATTCCTATTCCTACCAATAACCAAGGGAATTTCAGTAATGGTGCAATAATGTGGAGCACAAATTCTCAGCCTCAGAAAGATTATGAAGAAAACATGCCTATGTTATTGAACAACAACATGCAATGCAAGATGGAGCAATTCTCTTCTAATAACCACTCTATGGTAAGTGTGTCTCAAGACACATGCATCAGCAATGACAGAAACACTGATATAACATCCTCAGTGGTTTCCAAACATGACAATATAGGAAGGAATAATAATAATAATAATAATAATAATAACATTGCAGCATTATTGTATGATGATCTTGAATGTCCATCTTCAGTTGCTACACTCTCAGATTTGGATTGCATGTGGGATAATACTATTGACTACTGA 1101 0.3633 MEEAIVVNKGEESLGLPPGFRFQPTDEEIITCYLTQKVLNSSFSAIAMGEADFNKCEPWDLPKKAKMGEKDNWYFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKYANYNLPKVTKNEWVVSRVFHKNIDIRKIPLFKNNSIENDLLDFSSIHQPLMDPPYGTNQPSSSSNSFYYSPNLFINNNQNQNMLMKLEEHRTYEIPIPTNNQGNFSNGAIMWSTNSQPQKDYEENMPMLLNNNMQCKMEQFSSNNHSMVSVSQDTCISNDRNTDITSSVVSKHDNIGRNNNNNNNNNNIAALLYDDLECPSSVATLSDLDCMWDNTIDY 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1222 366 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 7 315 - -
Lal24g1222 366 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 315 - -
Lal24g1222 366 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lal24g1222 366 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Lal24g1222 366 SUPERFAMILY NAC domain 12 169 IPR036093 GO:0003677|GO:0006355
Lal24g1222 366 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1222 Lal-Chr24 13449999 13452372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1222 1 316 NAC Transcription Factor Family AT5G18270 54.878 4.03e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal24g1222 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1222 - - gmx:100784372 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1222 24 13449999 13452372 Lal24g1222 24 13449999 13452372 ECH