Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1221 ATGCTGAAACGCTCCGGCCACCACTCGCCGCCGGAATCTGTCTCCGATAAGATATTTCAGCTTCGAGGAGCGTTGGTGATTGTTGCGATCCCTATAGTTATTGTGTCGATAGTGCTTTATTTGATGCCTTCTAATGAAGATTACGCTCTCACACACCGTAAGATGTCGCCTAATTATAAATCATCTTACGCCGTTATCTTTGACGCTGGTAGTTCTGGTAGTCGTGTTCATGTCTTTCATTTTGATCATAATCTTGATCTCGTTAATATTGGCAATGATCTCGAGCTTTTTCTTCAGATTAAGCCGGGTTTGAGTGCATATGCACAAAATCCACAAGAGGCAGCAGAATCTCTGAGTTCTCTTTTGGATAAAGCGGAAAGTGTTGTTCCTCGGGAGTTTCGACCCAAGACACCCGTTAGAGTTGGGGCAACTGCGGGTCTGAGGACTTTGGAAGGGGATACTTCTGATAGGATCTTGCAAACAGTCAGGGATTTCCTTAAGCTAAGAAGCACTTTTAGATCTGATGCTGATTCGGTCACTGTGCTGGATGGAACTCAAGAAGGTGCTTATCAATGGGTCACTATTAACTATCTACTGGGAAACTTGGGAAAAGATTATTCAAAGACTGTTGGTGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATTTCAGAGACAGATGCTGCCAAGGCTCCTAAAGTACCAGATGGAGTGGATCCGTATGTCAAGAAGATGTTCCTAAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGCATTATGGTTTACTAGCAGCCCGTGCTGAGATTTTAAAGGTTTCTGATGATTCTGGAAACCCTTGCATCTTAGCTGGCTTTGATGATTCTTACAAATATGGAGGAAATTCATTCAAGGCCTCATCCCCCCCTTCTGGCGCAAGCTTGCATGAATGCAAAAGTATTGCTCTCAAGGCTCTCAAAGTTAACGAGTCAACATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGTGGGGATGGACGGAAAAACCTTTTTGTTGCCTCATTTTTCTTTGACCGAGCTGCTGAGGCTGGTTTTGCTGATCCAAACTCACCAGTCGTGAAAGTTCGTCCAGTGGATTTTGAAGATGCAGCTAAGCAAGCTTGTCAAACAAAACTCGAGGATGTAAAATCCACTTATCAGCATGTTGAGGACGGGAACCGTCCATATTTATGCATGGATCTTGTATACCAGTATACCTTGCTTGTTGTTGGCTTTGGCCTAGATCCATGGCAAGAGATTACATTGGTAAAGAAAGTTAAATATCGCGATGCTCTTGTTGAAGCAGCATGGCCCCTTGGCAGCGCCATAGAAGTTGTATCGTCTATGCAATGA 1398 0.4378 MLKRSGHHSPPESVSDKIFQLRGALVIVAIPIVIVSIVLYLMPSNEDYALTHRKMSPNYKSSYAVIFDAGSSGSRVHVFHFDHNLDLVNIGNDLELFLQIKPGLSAYAQNPQEAAESLSSLLDKAESVVPREFRPKTPVRVGATAGLRTLEGDTSDRILQTVRDFLKLRSTFRSDADSVTVLDGTQEGAYQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISETDAAKAPKVPDGVDPYVKKMFLRGRKYYLYVHSYLHYGLLAARAEILKVSDDSGNPCILAGFDDSYKYGGNSFKASSPPSGASLHECKSIALKALKVNESTCTHMKCTFGGIWNGGGGDGRKNLFVASFFFDRAAEAGFADPNSPVVKVRPVDFEDAAKQACQTKLEDVKSTYQHVEDGNRPYLCMDLVYQYTLLVVGFGLDPWQEITLVKKVKYRDALVEAAWPLGSAIEVVSSMQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1221 465 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 182 197 IPR000407 GO:0016787
Lal24g1221 465 PANTHER APYRASE-LIKE PROTEIN 2 463 - -
Lal24g1221 465 CDD NBD_sugar-kinase_HSP70_actin 65 224 - -
Lal24g1221 465 Pfam GDA1/CD39 (nucleoside phosphatase) family 60 463 IPR000407 GO:0016787
Lal24g1221 465 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 463 IPR000407 GO:0016787
Lal24g1221 465 Gene3D Exopolyphosphatase. Domain 2 183 442 - -
Lal24g1221 465 Gene3D - 63 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1221 Lal-Chr24 13435570 13442631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1221 6 463 Calmodulin-binding Proteins AT3G04080 66.309 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1221 K14641 - gmx:100804818 746.888