Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1218 ATGGAAAAGTCATACTCTATACCTCCATGCAGGATTGGAGGGAATAAATTCCATGCTGTGGATGACTCTCCTCCCTGGGCTTTTCCACTGGACAGTGTACCGGTTGAGCAAAATACTAGTCGCCCACCCACAACTCAGGCAAATGCAATAGCGAATTATGCTCCTCCTAAATTAAGAAATCACAAGAAAAAACGTATGGGTCCGGGAGGAATAGCTTTTATGGTTGGTGGAGGAACATTAATGGCAACCGGTTTGGCAGTCTTGATTGCAATCCGTTTGAGTAAATTTCATGCACAAAGAATGAAGTGCATAGAAAGCAATCATAGTTCATTGCCTTCTCATCCAATCAGTGCTGCCAAAGATGTCTCTTCTACGGTACTAGATGAGAGCCTGCAAATCCCACCTTTTAATTCTTCATCCCTTTTGGGTCCAAGACGATTGCATTTCCCGAACCATAAAAGAACAGGGGAAATGTCAAGAAGAAGTTTTTCTGAAAGAGACCGAGTCTCTGGAAGGACGAAAGTTTATACTGTTGCAGAAGTTCAGTTGGCTACAAACAGCTTCAGTGAAGACAACCTTCTGGGAGAGGGGTCTCTAGGCCCTGTTTATAGAGCTGAATTTCCAGATAACAAGGTCTTGGCCGTGAAAAATATCAGCATGGCAGGGTTGTCTTTCAGTGAAGAGGAAAAGTTCTTAGATGTCATTTGCACCGCAGCACGTTTGAAGCATCCCAACATTGTTGCACTTAAAGGTTACTGTTTGGAGCACGGACAGCATCTTGTTGTCTATGATTATGTCAGAGATTTAACTCTAGAAGATGCTATTCATAGTAAAACATACAAACCGTTATCATGGGGCCTCCGTCTCAGGATTGCTCTAGGTGTTGCTCTGGCTCTTGACTATTTGCACTCCACATTTTCCCCTCCTGTTCCACACGGCAACTTGAAGGCTGCCAATGTTCTACTGGACGAAAATCTGATACCTCGTGTTTGTGACTGTGGCTTGGCTGTTTTGAGACCACTGACTAGCAACAAAGTCAAAACTCGAGCTTCTGAGATTATGAATAGAGATGCAGGCTACAGTTCACCTGAGCATGGCCAATCAGGAATGGGCAACACAAAGAGTGATATCTTTGCCTTTGGTGTGTTGCTTCTGGAATTGTTAACAGGAAGAAAACCTTTCGATGGTTCAAGGCCAAGGGAAGAGCAATATCTAGCAAAATGGGCTTGCTCAAGGCTGCACGATAGCGAGAGTTTGGAACAGATGGTAGATCAAGAAATTAAAAGGACATTTTCATCCATGGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGCATACAGCCTGTAAAGGAGTTTCGTCCTCAAATGTCTGAAGTTGTGGACTCTCTTGTATCTTTTTCTCAAAAGCTCAACATGTCAAAGAGCAGAGTAAAAGATGGTACTGCACTTGATGATCCGCTTGAGAGCAAACTGAAGCAAGAACTAATAACAACAAACACTGAATCTGAACCAAATTCAAGAAGTGCGGAAACTGGTAGCAATTGGGATAACAATGAGAAGAATGATAATGAGCAAAAGTATGAGCCCAATGCACATGCACTTCCTACTCCCACTCTGATACTTCTTTGCAGTATGAAGATTCTTAGTTCCATCCTTAACATAATGAGAAGCATGAAGAACATGGTGTTCAATATCATCCATCTTCTCACCCTGTGCCTCAACCATTACAGCCATATCCAAGAAAACCTGATGCAACTCCAACAAACTCTTCTCAATATCTTTAGCAGCATCATACCTGTCCTGTTTTCGAGTATGACCCGAATTGTATTCATTTCTGATTTCACTTTCTCTGCTTCTTCAAGGAAGAGACCCATATCAATATCAAGTTTTGGGTTGGAAGTGAGTCAGTTATAA 1917 0.4241 MEKSYSIPPCRIGGNKFHAVDDSPPWAFPLDSVPVEQNTSRPPTTQANAIANYAPPKLRNHKKKRMGPGGIAFMVGGGTLMATGLAVLIAIRLSKFHAQRMKCIESNHSSLPSHPISAAKDVSSTVLDESLQIPPFNSSSLLGPRRLHFPNHKRTGEMSRRSFSERDRVSGRTKVYTVAEVQLATNSFSEDNLLGEGSLGPVYRAEFPDNKVLAVKNISMAGLSFSEEEKFLDVICTAARLKHPNIVALKGYCLEHGQHLVVYDYVRDLTLEDAIHSKTYKPLSWGLRLRIALGVALALDYLHSTFSPPVPHGNLKAANVLLDENLIPRVCDCGLAVLRPLTSNKVKTRASEIMNRDAGYSSPEHGQSGMGNTKSDIFAFGVLLLELLTGRKPFDGSRPREEQYLAKWACSRLHDSESLEQMVDQEIKRTFSSMALSRYADIISLCIQPVKEFRPQMSEVVDSLVSFSQKLNMSKSRVKDGTALDDPLESKLKQELITTNTESEPNSRSAETGSNWDNNEKNDNEQKYEPNAHALPTPTLILLCSMKILSSILNIMRSMKNMVFNIIHLLTLCLNHYSHIQENLMQLQQTLLNIFSSIIPVLFSSMTRIVFISDFTFSASSRKRPISISSFGLEVSQL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1218 638 MobiDBLite consensus disorder prediction 497 517 - -
Lal24g1218 638 SUPERFAMILY Protein kinase-like (PK-like) 164 464 IPR011009 -
Lal24g1218 638 Gene3D Transferase(Phosphotransferase) domain 1 268 487 - -
Lal24g1218 638 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 11 483 - -
Lal24g1218 638 Gene3D Phosphorylase Kinase; domain 1 151 265 - -
Lal24g1218 638 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1218 638 MobiDBLite consensus disorder prediction 497 530 - -
Lal24g1218 638 Pfam Protein tyrosine and serine/threonine kinase 192 464 IPR001245 GO:0004672|GO:0006468
Lal24g1218 638 PANTHER OS01G0253100 PROTEIN 11 483 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1218 Lal-Chr24 13414122 13418437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1218 6 488 Strubbelig Receptor Gene Family AT5G06820 52.058 2.24e-148 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal24g1218 PK_Tyr_Ser-Thr 1.5e-33 CL0016