Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1196 ATGGAGAAGAACATTGCAGAACATTCCACTAGTGATGGTAAACCTTTAGAAAATGGTGAGCATGCAATTATAAAAGAAGAGGAAAGTTTAGAACAAGAAGTTGAAAAGGTGGAAGAAGAAATAAAGAAAAATGAAGAAGGTGATGTTGATGCTAAAGAGAAAAATGAAGAAGAAGAAGAAGAAGAAGAAGATGGTGTTGTTGAGATTCCTCCTCCTCCTAGGTTGGAGAATGTTTTTGAAGACATTGATGCATATATCAATGCAAATTCTAGGTCAAAGATCCCTGATTTCATTCACATGTTCTTAAATATTGTGGAAGAGAAGATCTCAAGCTATGACAATGGAAAAACCAAATGGGGTGAAGCTAAGGAAGAAGATTCATCATTGCTAGAAGCCGTTGATCGCATTTCGAAACTCATAAAACTGATACCCGAGTCGTCAATATCATCGTCACAAATCGAAGAAGAAGAAGAGATCGATGCAAGGAATGTAAAGAACTCCTTGTTGAAGAATCGCATTGGTGAAATTCATCAACAAGCAATGTCTTATTTTGAGGACGAGTTTCGATTGCTATTAGAGGAACCACAAAATCGAATTGAACCTGAATCGAACAAACATGATCCAAAAGGAAAACACGTGACAGAACCACAACCACAACCACAACCTCAACCATCTGATTCTGAACCCGATTCAGAACGAGTTCCTACTTTCCCCGGTTATAGAGATGAAGCAATATCGAATCTAAACAACATAGCAATGAAAATGATTTCAGGTGGTTACCAATCAGAGTGCTACAACATATACTTTATGTCACGAAAACATGCCTTTGAAGAATGCTTACACAAGCTAGGGTTAGAGAAAATAAGCATAGACGATGTTCATAAAATGCAATGGGAAGCATTGGAGAGGGAGATTCCAACATGGAACAACACTTTCAAGGAATGCATGGAAGTTTATTTCCCCGGCGAGAGGAAGCTGGCGGCGGCGGTGTTTTCCGATGACCGGACAATGGCGGATAATGTGTTCATGATGGTGTGCCACCGAGTGGTGATTGAACTTGTGAACTTTGCAGAAGCAATTGCAATGACTAAACGTTCTGGAGAGAAATTGTTTAAGTATCTAGATATGTATGAGACATTAAGGGATTTGATTATGAATTTGGATAAATTGTTTCCTCAAGAATGTGTTGAAGAGTTGAAGGCTGAAACAACTTCTGCTAAGTGTAGGCTTGGTGAATCTACTATTGTTATTTTTTGTGAACTTGAGAACTCTATCAAATCCGACACCGGTAAAACGCCCGTTGCCGGCGGTGCAGTTCATCCACTTACCAGGTACATCATGAACTACTTGAAGTTTGCATGTGAATACAAAGATACATTGGAGGATGTGTTCAAAGAGCACTCAAAGATAGAACGTGCAGATTCAACTAGTAGACCCTATTATGAGGCTGAGAACAAAAATGAAAACCATAGGGAAAATGTATCACCATTTGCAGCACAACTTATGAGGGTAATGGAATTACTTGACTCTAACCTAGAAGGTAAGGCAAATTTGTACAAGGATTCTGCATTAAGTAGCATATTCATGATGAACAATGGAAGGTATATAGTTCAAAAAATAAAAGGGTCTCAAGATTTATATAAAGTAATGGGTGAAACATGGTGTAGAAAAAGATCCTCAAATCTAAGGACATACCATAAGAACTATCAGATTGAAACATGGAGCAAAATATTAGGATGTTTAAGCCCTAAGGGATTGAATGACAATGGTAAGGTACATAAGCCTGTGCTTAAGGAAAGGTTCAAGAGCTTCAATGCATTGTTTGAAGAGATACATAAGACACAAAGTACTTGGGTAGTGAGTGATGAACAACTTCAATCAGAACTTAGGGTTTCTATATCAGCACTTGTTATTCCAGCTTATAGGTCATTTTTGGGAAGGTTTTCACAGTATTTGGATCTAGGGAGACAAACTGAGAAGTATATAAAGTTTCAAGCTGAAGATATAGAGACTTATATTGATGAGTTATTTGATGGGAACCCTCATCATCAATCTCTTGCAAGAAAGAAAGCATGA 2076 0.3786 MEKNIAEHSTSDGKPLENGEHAIIKEEESLEQEVEKVEEEIKKNEEGDVDAKEKNEEEEEEEEDGVVEIPPPPRLENVFEDIDAYINANSRSKIPDFIHMFLNIVEEKISSYDNGKTKWGEAKEEDSSLLEAVDRISKLIKLIPESSISSSQIEEEEEIDARNVKNSLLKNRIGEIHQQAMSYFEDEFRLLLEEPQNRIEPESNKHDPKGKHVTEPQPQPQPQPSDSEPDSERVPTFPGYRDEAISNLNNIAMKMISGGYQSECYNIYFMSRKHAFEECLHKLGLEKISIDDVHKMQWEALEREIPTWNNTFKECMEVYFPGERKLAAAVFSDDRTMADNVFMMVCHRVVIELVNFAEAIAMTKRSGEKLFKYLDMYETLRDLIMNLDKLFPQECVEELKAETTSAKCRLGESTIVIFCELENSIKSDTGKTPVAGGAVHPLTRYIMNYLKFACEYKDTLEDVFKEHSKIERADSTSRPYYEAENKNENHRENVSPFAAQLMRVMELLDSNLEGKANLYKDSALSSIFMMNNGRYIVQKIKGSQDLYKVMGETWCRKRSSNLRTYHKNYQIETWSKILGCLSPKGLNDNGKVHKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDLGRQTEKYIKFQAEDIETYIDELFDGNPHHQSLARKKA 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1196 691 Coils Coil 20 62 - -
Lal24g1196 691 MobiDBLite consensus disorder prediction 1 74 - -
Lal24g1196 691 Pfam Exo70 exocyst complex subunit 308 675 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal24g1196 691 MobiDBLite consensus disorder prediction 51 66 - -
Lal24g1196 691 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 49 682 - -
Lal24g1196 691 SUPERFAMILY Cullin repeat-like 122 678 IPR016159 -
Lal24g1196 691 MobiDBLite consensus disorder prediction 196 239 - -
Lal24g1196 691 PANTHER EXOCYST COMPLEX PROTEIN EXO70 49 682 IPR004140 GO:0000145|GO:0006887
Lal24g1196 691 MobiDBLite consensus disorder prediction 196 213 - -
Lal24g1196 691 MobiDBLite consensus disorder prediction 1 50 - -
Lal24g1196 691 Gene3D Exocyst complex component Exo70 109 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1196 Lal-Chr24 13214117 13216919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1196 93 690 EXO70 exocyst subunit family AT5G13990 52.778 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1196 K07195 - gmx:100819960 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1556 13 15352872 15355651 Lal24g1196 24 13214117 13216919 LSH
Lal25g1171 25 15157439 15159514 Lal24g1196 24 13214117 13216919 PCT
Lal24g1196 24 13214117 13216919 Lal25g1171 25 15157439 15159514 PCT