Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1195 ATGGAAAAGCTTCAAAACTTTGTTGGTGTTAATGGAGGTATCAAGTTACCTGTTGGGTATAGGTTTTGTCCCACTGATGAAGAACTTGTCATTCATTACCTTAAGAAGAAGGTTTTTTCTGAACCATTACCTGGTTCAGTTATTTCTGACTTTGATGTCTTTCACACTGTTCCTTGGAACCTCCCAGGTGATTCCAAAGAGAAGAGGTATTTTTTTAGCAATAGAAAAGGCCATGTTTGTGGAAACATTAGCAAAGTAGCTATTGGTTCTGGGTATTGGAAATCTATTGGAAAAGAAAAACAAATTGTTTCCTCTGAGAGCAGGCAAGTAATTGGGATGAGGAGAACACTAATTTTTAGCAGAGGGAAATGTTTTGATGATACCCGAACTCGGTGGTTCATGCATGAATTTCGCCTTGTAGGATCGGCAACAACTTTCTACCCATTTCAGATGCCAGTAGCCGATTTCGATTTCGCTGTGTATCGCGTATTTCAGAAGAAGAAGAAGCTGAAGACAAAAGGGTCTAATGAGAAAGTCACTAGCAGTTGGAAAGTTAAGGATATTAAACCAAATTTCATAGATTTCACTGTGAAATATGGTGATGATATAGGCCCACCACCACCTTGTTCCCCATGTCTTAGTGAAGGTAGTGAAATAATCTCATCAAATTAG 672 0.3869 MEKLQNFVGVNGGIKLPVGYRFCPTDEELVIHYLKKKVFSEPLPGSVISDFDVFHTVPWNLPGDSKEKRYFFSNRKGHVCGNISKVAIGSGYWKSIGKEKQIVSSESRQVIGMRRTLIFSRGKCFDDTRTRWFMHEFRLVGSATTFYPFQMPVADFDFAVYRVFQKKKKLKTKGSNEKVTSSWKVKDIKPNFIDFTVKYGDDIGPPPPCSPCLSEGSEIISSN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1195 223 Pfam No apical meristem (NAM) protein 17 139 IPR003441 GO:0003677|GO:0006355
Lal24g1195 223 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 16 175 - -
Lal24g1195 223 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Lal24g1195 223 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Lal24g1195 223 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Lal24g1195 223 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1195 Lal-Chr24 13193140 13195380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1195 11 168 NAC Transcription Factor Family AT5G13180 46.875 8.96e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal24g1195 NAM 5.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1195 - - lang:109340127 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1195 24 13193140 13195380 Lal19g1011 19 13974574 13976692 ECH
Lal24g1195 24 13193140 13195380 Lal7g0864 7 15201668 15203828 ECH
Lal24g1195 24 13193140 13195380 Lal14g1434 14 15554391 15556209 ECH
Lal24g1195 24 13193140 13195380 Lal24g1195 24 13193140 13195380 ECH
Lal13g1554 13 15330897 15333476 Lal24g1195 24 13193140 13195380 LSH