Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1191 ATGGGGAATGGAATAGAGATTGTTGAACCAAACAGGTGTATTAGAGGATGCTGCACCAGTTCCTCTATTCCTCTTCATCTCCCTCCTTCTTCTTTTACTCTTCTCTCTCCTATCGCTCGAGGGGCAGAGAGTGTTGTTTATGAAGGGACTTTGAATGGAAAGAAGGTTGCTGTGAAAAAACCCATCTTGTCAATTTCAGATGACATTGATAAATTTCATAAAGAATTACAATTGCTATGCAAGCTAGATCACCCGGGAATCGCTACACTTATTGCTGCCCATGCAAAGCCACCCAACTACATGTTTTTCTTCAAGTTCTACGAATCTCTAAGTCTCGCGCATAAGTTACACGCCGAAGAATGGACCCCGACTATCAGTCACATACTTATGATAACAATTCAGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTACATCGAGATGTGAAACCAGCAAATATTCTTCTTGACAAAAATCTTTGTCCGCACCTCACGGATTTTGGTTTGGCAGAATACACGAGTGATCTTAAGGGAGTTAATTTTGTTAATTGGAAGTCTTCTGGAAAGCCTACAGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGCAATTACATACCGAAAAATCGGATGTCTACAGTTTTGGGGTCTCAATCAATGAAGTTCTTACCGGTGTTGTGCCATATACTGATCTTCGCGCAGAAGCACAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAACTGACAGCAGCTGTTGTTTCTGATGGATTACGGCCAGCCCTTGCTACTGAGGAGTTCGGTATACCATCAAGGTTATTATCAATAATACAGAAGTGCTGGGATGAAAATCCGGAAAACCGACCTTCCTTTGATGATATAGTTAAGGAACTTGATTTCATAATGGAGGACAGGAAAATGCACAATGCAGAAGATATTTATATCAGAACTCGTAACTTGCATGACGATCAGCGTGAGGACGAGATCCTTCAGCCTTATGAAGAGAGTATTAACTGGTCTTCTCAAGGTGAAATTTTGGCTAGGAGTGTCTCTAGTGCAACTGACTCTGGTTTGAGAACTTGGCACGAGTCTTGTGATGAGCCTGTTGCCTTCCATCCAACACTCTCTTGGGGATCTTATGCTACCTGTGGGCGAAGAGAGACTATGGAGGACACACATTTCGTTCTGCCACATATGTGCAATGAAAAGGATCTCTATGGTTTTGGTATTTTTGATGGTCATAGAGGTGCAGCAGCGGCGGAGTTTTCTTCAAGAGCTCTACCCATATTTTTGCAAACTTTAGATTTTACAGGCAGTCCTGCTAATGCATTGGTTGAAGCATTCCTTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCCCATCGTAAATCGAACAGATATATCCAGAAGGATTGGCATCCTGGTTGTACAGCAATTGCTGCTCTTGTAGTCAGGAACAAGCTATTTGTTGCTAACATAGGTGATTGCAGGGCAATCTTATGTCGTGCCGGTAATCCCATTGCCCTTAGTAAGGATCATGTTGCTAGCTGTGTTGAAGAGAGAGAGCGCATTATTCGACATGGGGGCCAAGTACATTGGCAAGTTGATACTTGGAGGGTTGGTCTTCCTGCGCTTCAGGTTACTCGTTCTATTGGGGATGATGATCTTAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAAAGGACCTTATCTGCAGAGGATGAATATATTGTTATTGCTAGTGATGGACTTTGGGATGTCCTAAGCAGCATGGAAGTGATAAATATAATAAAAAACACAGTTAAAGAGCCTGGAATGTGCTCTAAGAGGTTGGCTAGTGAAGCAGTGGAACTTGGAAGCAAAGATAACATTACAGTTATTGTTGTATTTTTATGTCCTGTTTCTACAGCTGAGAGAATTTATTAA 1977 0.4198 MGNGIEIVEPNRCIRGCCTSSSIPLHLPPSSFTLLSPIARGAESVVYEGTLNGKKVAVKKPILSISDDIDKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKFYESLSLAHKLHAEEWTPTISHILMITIQLAKALQYLHNLGIVHRDVKPANILLDKNLCPHLTDFGLAEYTSDLKGVNFVNWKSSGKPTGGFHKKNMVGTLIYMAPEILRKQLHTEKSDVYSFGVSINEVLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPALATEEFGIPSRLLSIIQKCWDENPENRPSFDDIVKELDFIMEDRKMHNAEDIYIRTRNLHDDQREDEILQPYEESINWSSQGEILARSVSSATDSGLRTWHESCDEPVAFHPTLSWGSYATCGRRETMEDTHFVLPHMCNEKDLYGFGIFDGHRGAAAAEFSSRALPIFLQTLDFTGSPANALVEAFLRTDAAFRKELDSHRKSNRYIQKDWHPGCTAIAALVVRNKLFVANIGDCRAILCRAGNPIALSKDHVASCVEERERIIRHGGQVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITERTLSAEDEYIVIASDGLWDVLSSMEVINIIKNTVKEPGMCSKRLASEAVELGSKDNITVIVVFLCPVSTAERIY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1191 658 PANTHER PROTEIN PHOSPHATASE 2C 4 658 IPR015655 GO:0004722|GO:0006470
Lal24g1191 658 CDD PP2Cc 393 648 IPR001932 -
Lal24g1191 658 SUPERFAMILY PP2C-like 385 648 IPR036457 -
Lal24g1191 658 ProSiteProfiles Protein kinase domain profile. 32 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1191 658 Pfam Protein kinase domain 34 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1191 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lal24g1191 658 PANTHER - 4 658 - -
Lal24g1191 658 Pfam Protein phosphatase 2C 396 641 IPR001932 -
Lal24g1191 658 ProSiteProfiles PPM-type phosphatase domain profile. 391 648 IPR001932 -
Lal24g1191 658 SMART serkin_6 32 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1191 658 SMART PP2C_SIG_2 406 648 IPR001932 -
Lal24g1191 658 SUPERFAMILY Protein kinase-like (PK-like) 19 323 IPR011009 -
Lal24g1191 658 Gene3D Transferase(Phosphotransferase) domain 1 21 346 - -
Lal24g1191 658 SMART PP2C_4 381 646 IPR001932 -
Lal24g1191 658 Gene3D - 383 650 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1191 Lal-Chr24 13120629 13129325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1191 101 658 PP2C-type Phosphatase Gene Family AT2G40860 65.062 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Lal24g1191 Pkinase 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1191 - - gmx:100785390 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1191 24 13120629 13129325 Lal24g1191 24 13120629 13129325 ECH