Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1186 ATGTTATCTGAATCATGTGTTATGATTGCAACAATAATTATTGTTCTTGTAGAAATAATTGTTGGAGTTAATTCATTTCCAGAAGCTGATAAAATAAGCACTTTACCTGGGCAGCCACAAGTTAAGTTTAAGCAATATTCTGGTTACATTACAGTAGATGAGAAACAGAAAAGAGCTTTATTTTATTACTTTTCTGAAGCAGAAGTTGAATCTGCTTCTAAGCCACTAGTTCTATGGTTAAATGGAGGACCTGGTTGTTCTTCTGTTGGAGCTGGTGCTTTTATTGAGCATGGACCTTTTAAACCAAGTGAAAATGGTCTTGTGAAAAATGAATATAGTTGGAATAAAGAGGCAAATATGTTGTATTTGGAATCACCAGCTGGTGTTGGTTTCTCCTATTCTACTAATCAATCTTTCTATGACTTTGTGAATGATGAAATCACAGCAAAGGATAATCTTGTTTTCCTGCAGAATTGGTTCACTAAGTTCCCAGAGTACACAAACAATGACTTTTTTATCACAGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTGAAAACCAAGACCAAGTTCAATCTCAAGGGAATTGCAATAGGGAATCCTCTTTTGGAATTTAACACAGATTTCAACTCCAGAGCTGATTTTTTATGGTCTCATGGACTGATATCAGATTCAACTTTCAAAATCTTCACTAAAGTCTGCAACTATTCCCAAATTAGAAGACAAGTTCAAAGTGGAACACTTAGTTCCATTTGTGCAGGAGTAAATAAACTAGTGTCAACAGAAGTTAGTAGATATATTGATGCATATGATGTTACTCTTGATGTTTGTTTGTCATCAGCATATCAACAAGCTTATGTGCTGAATCAACTGACTCAATTGCAAGAGGTAGCAAGGGTAGATGTATGTGAGGAAGATGAAACAATCACATACTTAAATAGAAAAGATGTGCAAGAAGCTCTCCATGCTAGGCTTGTAGGGACCAATACTTGGTCAACTTGCAGCGAGGTTCTCAAATATGATATGCAGAATCTAGAAGTTCCAACCATTTCTATTCTAGGGGCACTTTTTAAGTCAAATATCAGGGTTCTAGTATATAGTGGTGATCAAGATTCAGTAATTCCTTTACTTGGGACCAGATCACTGGTAAATGGATTAGCCAAGGAGTTTGAACTCAATACAACAATATCCTATAGAGCCTGGTTTGAAGGAAAACAGGTAGCTGGATGGACACAAGTATATGGTAACATTTTATCATTTGCCACCATAAGAGGTGCATCTCATGAAGCTCCATTTTCACAACCAGAGAGATCATTAGTGCTACTAAAAGCATTTTTGGAAGGAAAACCACTTCCAGGAGTATTATCTGTAATATGA 1395 0.3649 MLSESCVMIATIIIVLVEIIVGVNSFPEADKISTLPGQPQVKFKQYSGYITVDEKQKRALFYYFSEAEVESASKPLVLWLNGGPGCSSVGAGAFIEHGPFKPSENGLVKNEYSWNKEANMLYLESPAGVGFSYSTNQSFYDFVNDEITAKDNLVFLQNWFTKFPEYTNNDFFITGESYAGHYVPQLAQLIVKTKTKFNLKGIAIGNPLLEFNTDFNSRADFLWSHGLISDSTFKIFTKVCNYSQIRRQVQSGTLSSICAGVNKLVSTEVSRYIDAYDVTLDVCLSSAYQQAYVLNQLTQLQEVARVDVCEEDETITYLNRKDVQEALHARLVGTNTWSTCSEVLKYDMQNLEVPTISILGALFKSNIRVLVYSGDQDSVIPLLGTRSLVNGLAKEFELNTTISYRAWFEGKQVAGWTQVYGNILSFATIRGASHEAPFSQPERSLVLLKAFLEGKPLPGVLSVI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1186 464 Gene3D - 309 344 - -
Lal24g1186 464 PANTHER CARBOXYPEPTIDASE 6 461 - -
Lal24g1186 464 Pfam Serine carboxypeptidase 36 454 IPR001563 GO:0004185|GO:0006508
Lal24g1186 464 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Lal24g1186 464 Gene3D alpha/beta hydrolase 27 285 IPR029058 -
Lal24g1186 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 461 IPR001563 GO:0004185|GO:0006508
Lal24g1186 464 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Lal24g1186 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Lal24g1186 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Lal24g1186 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Lal24g1186 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Lal24g1186 464 Gene3D - 356 454 - -
Lal24g1186 464 SUPERFAMILY alpha/beta-Hydrolases 34 458 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1186 Lal-Chr24 12980626 12986001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1186 317 457 Calmodulin-binding Proteins AT2G22960 29.371 2.47e-16 75.5