Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1185 ATGGGTAGTAGAACTAGAAAAGTGAACTTTAACACTGAGGAAGATAACAAGTTTGTGAAAGTGATGCCAAGCTATGCTCCTTCAATGCCTTCTTCTAATTCCATGGGCATAGAAGGAACTACTGTTCATCCTTCTCAAATTTCCGAGTATGGAAACCTCGAGCAATCTATTGGATTTCGTTTGGACGATGCTATCAATCTTAGCAGAAATCCAGTGTTCAATCTAATGAAGTCGAATAACCAAGGTCTAGGTTCTGATGTTCAGTTTGGTGCTTTGAATAAGTCAGTTGCAGCCTCAGATGTTAACCTCTTTGCCACGATGGTTGGGTCTCAGACATTACCATTGCAAAAGGACTTGCCACCAAATTCGGCTTACACATCGGCTGGTCATCATGAGAACTGGGGAGAGTCCAGCATGGCAGATGCGAGCCCTATGACCGATTCTTCAACAGATGATACTGATGATAAAAATCAAAGGCCTGAAAGGGGTCAATTAGCTGTTGCAACTGCTTATTCCAGTGATAGAGCCAAAGATAAATCGAACCAAAAGACATTACGACGGCTAGCTCAAAATCGGGAGGCTGCCAGAAAAAGCAGACTGAAGAGAAAGGCATATGTTCAACAATTAGAGAGTAGTAGACTGAAACTAACCCAACTTGAGCAAGAGCTCCAGAAAGCCCGCCAGCAGGGGACTTTTATTTCAAGCACGGGATATCAGGACCATTCATTGAGTGGAAATGGCGCTATGCAATTTGATGCAGCGTATGCACGATGGTTAGAGGAACATAATAGGCAAATCAATGAGTTAATGACTGCAGTAAATTCTCACGCCGGAGATATTGAACTCCGTACAATTGTAGACAATGCCATTACACAATTTGATGAGATCTTCAGGCTAAAAAGCATTGCAGCTAAAGCCGATGTTTTCCATATTCTGTCTGGAATGTGGAAGACTCCAGCTGAGAGATGTTTCATATGGATTGGAGACTTTCGCTCTTCTGAGCTTCTCAAGCTGCTTGCAAATCAACTGGAGCCTTTAAGCGAGCAACAATTAACAGGCATCTACAACTTGCAGCAGTCATCCCAGGAAGCCGAAGATGCTCTGTCCCAAGGAATGGATGCATTGCAGCAATCATTAGCCGAGACATTGGCTAATGGTGCGCCCAGCCCGTCAGGATCTTCCGGAAATGTGGCGAATTATATGGGGCAAATGGCTATGGCCATGGGAAAGCTTGGTACTCTTGAGGGGTTCCTTCACCAGGCTGATAACCTAAGGCAGCAAACATTACAACAAATGCTTCGGATATTAACAACCAGGCAATCGGCTCGAGCTCTTCTTGCAATAAGCGATTATTTCGCTCGGCTACGAGCCCTAAGCTCGTTATGGCTTGCCCGGCCAAAAGAGTAA 1407 0.4456 MGSRTRKVNFNTEEDNKFVKVMPSYAPSMPSSNSMGIEGTTVHPSQISEYGNLEQSIGFRLDDAINLSRNPVFNLMKSNNQGLGSDVQFGALNKSVAASDVNLFATMVGSQTLPLQKDLPPNSAYTSAGHHENWGESSMADASPMTDSSTDDTDDKNQRPERGQLAVATAYSSDRAKDKSNQKTLRRLAQNREAARKSRLKRKAYVQQLESSRLKLTQLEQELQKARQQGTFISSTGYQDHSLSGNGAMQFDAAYARWLEEHNRQINELMTAVNSHAGDIELRTIVDNAITQFDEIFRLKSIAAKADVFHILSGMWKTPAERCFIWIGDFRSSELLKLLANQLEPLSEQQLTGIYNLQQSSQEAEDALSQGMDALQQSLAETLANGAPSPSGSSGNVANYMGQMAMAMGKLGTLEGFLHQADNLRQQTLQQMLRILTTRQSARALLAISDYFARLRALSSLWLARPKE 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1185 468 CDD bZIP_HBP1b-like 183 235 - -
Lal24g1185 468 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 64 468 - -
Lal24g1185 468 MobiDBLite consensus disorder prediction 113 147 - -
Lal24g1185 468 MobiDBLite consensus disorder prediction 113 184 - -
Lal24g1185 468 ProSiteProfiles DOG1 domain profile. 248 465 IPR025422 GO:0006351|GO:0043565
Lal24g1185 468 Coils Coil 202 229 - -
Lal24g1185 468 SMART brlzneu 179 242 IPR004827 GO:0003700|GO:0006355
Lal24g1185 468 Gene3D - 181 235 - -
Lal24g1185 468 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Lal24g1185 468 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Lal24g1185 468 SUPERFAMILY Leucine zipper domain 183 227 IPR046347 GO:0003700|GO:0006355
Lal24g1185 468 Pfam Seed dormancy control 265 340 IPR025422 GO:0006351|GO:0043565
Lal24g1185 468 Pfam Basic region leucine zipper 179 225 IPR004827 GO:0003700|GO:0006355
Lal24g1185 468 PANTHER TRANSCRIPTION FACTOR TGA9 64 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1185 Lal-Chr24 12966818 12973074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1185 139 468 bZIP Transcription Factor Family AT3G12250 72.205 4.91e-168 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal24g1185 DOG1 2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1185 K14431 - gmx:778136 681.404