Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1134 ATGGGCAATAACTGCGTGGGACCAAATTCCCTCGGTGGGAATGGGTTCATGCAAAACGTTTCAGCGGCGCTTTGGAGAACCCGCCCACCGGAGGCTAGGCTTCCGCCGGCGAGCGACGCAGCAGCCACTGACAACAACAAGAACAAATCCACGGCGTCTCCGCCCCATGATTCCTCAAAACATTCAAGTACCGGCAAAGGTTCCGACAACTCAAAAGGCCATAATGATCCTCCCATGCCGGTTCAGAGCACACCGCCTGAACCGGTCAAAATAGCCGCATCCGGAGAAACAAAACCGGTGCCAGTTCAACCTGAAAAGCCAGTTAACCTAGTGGTAAATAATGAACTGGCACCGGTTAACATCGGCGCTGGCGCTGGCGCTGGTGGTGGTGATGGTGGTAAAGCTAAGAAACCTACTCATGTTAAGAGGGTTTCAAGCATAGGGCTTCAAGTAGAGTCAGTGTTGGGTAGAAAAACTGGGAACTTAAAGGATGTTTATAGCTTGGGAAAGAAGTTAGGTCAAGGTCAATTTGGTACAACATATTTATGTGTTGAGAAAGGAACTAATAAAGAGTTTGCATGCAAATCAATTCCTAAAAGAAAATTAACAACACAAGAAGATGTTGAAGATGTTAGAAGGGAGATTCAGATAATGCACCACATGGCTGGTCACCCAAATGTGATTCAGATAATTGATGCTTATGAAGATGTTGTAGCTATTCATGTTGTAATGGAACTATGTGCTGGTGGAGAACTCTTTGATAGGATCATACAGAGAGGACATTATACTGAAAAAAAAGCTGCTGAACTTGCTAGGTTGATTGTTAGTGTTGTTGAGGCTTGTCATTCTTTAGGTGTTATGCATAGAGATTTGAAGCCAGAGAACTTCCTCTTCATCAATCATGAGGAAGAATCGCCTCTTAAGACAATCGATTTCGGTCTTTCCGTGTTCTTTAGACCAGGTGAAACATTTACTGATGTGGTTGGGAGTCCATACTATGTTGCCCCTGAAGTTTTGAGGAAGCAATATGGTCCAGAATGTGATGTTTGGAGTGCTGGAGTTATCATTTATATTTTACTAAGTGGAGTTCCTCCTTTTTGGGATGAAACCGAGCAAGGAATATTTGAGCAAGTTTTGAAAGGAGATCTTGACTTTGTTTCTGAACCATGGCCTAACATTTCTGAAAGTGGAAAGGATCTTGTTCGCAGAATGCTTATAAGAGACCCGAAGAAGCGAATGACCGCACACGAAGTTCTCTGTGAGTATGCGTATCTCGTCAATGCTACATTAAATTTCGTCTTCGAAAAGATTGGAGGTGCTGCGCCTGATAAACCACTTGATTCCGCTGTCTTATCTCGCTTGAAGCAATTCTCTGCAATGAATAAGCTCAAAAAAATAGCGATTCGAGTAATTGCTGAAAGTCTTTCAGAAGAGGAAATTGGAGGACTAAAAGAAATGTTCAAGATGATAGACACAGATAATAGTGGACAAATCACTCTTGAGGAACTCAAAAATGGTTTGGAGAGAGTAGGCTCCATTCTTAAGGATTCAGAAATCGATTGGTTAATGCAAGCAGCAGATGTGGATAACAGTGGTACCATAGACTATGGTGAATTCATAGCAGCTATGATTCATCTAAACAAGGTCCAGAAGGAGGATCATCTATTTGCAGCCTTCTCCTACTTTGACAAAGATGGGAGTGGATACATCACAAAAGATGAGCTTCAACAAGCTTGTGAACAGTTTGGCCTAAAAAATGATCACTTAGATGATATAATACCTGAAGTTGACAAAGATAATGATGGACGCATTGATTACAGTGAGTTTGCTGCAATGATGCAAGACACTGGTTTTGGCAAACTACAAATAGCTTGA 1875 0.4229 MGNNCVGPNSLGGNGFMQNVSAALWRTRPPEARLPPASDAAATDNNKNKSTASPPHDSSKHSSTGKGSDNSKGHNDPPMPVQSTPPEPVKIAASGETKPVPVQPEKPVNLVVNNELAPVNIGAGAGAGGGDGGKAKKPTHVKRVSSIGLQVESVLGRKTGNLKDVYSLGKKLGQGQFGTTYLCVEKGTNKEFACKSIPKRKLTTQEDVEDVRREIQIMHHMAGHPNVIQIIDAYEDVVAIHVVMELCAGGELFDRIIQRGHYTEKKAAELARLIVSVVEACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGDLDFVSEPWPNISESGKDLVRRMLIRDPKKRMTAHEVLCEYAYLVNATLNFVFEKIGGAAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIGGLKEMFKMIDTDNSGQITLEELKNGLERVGSILKDSEIDWLMQAADVDNSGTIDYGEFIAAMIHLNKVQKEDHLFAAFSYFDKDGSGYITKDELQQACEQFGLKNDHLDDIIPEVDKDNDGRIDYSEFAAMMQDTGFGKLQIA 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1134 624 MobiDBLite consensus disorder prediction 41 78 - -
Lal24g1134 624 ProSitePatterns EF-hand calcium-binding domain. 563 575 IPR018247 -
Lal24g1134 624 Pfam Protein kinase domain 166 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1134 624 CDD STKc_CAMK 165 419 - -
Lal24g1134 624 Gene3D - 433 615 - -
Lal24g1134 624 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
Lal24g1134 624 ProSiteProfiles Protein kinase domain profile. 166 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1134 624 ProSitePatterns EF-hand calcium-binding domain. 527 539 IPR018247 -
Lal24g1134 624 ProSiteProfiles EF-hand calcium-binding domain profile. 478 513 IPR002048 GO:0005509
Lal24g1134 624 CDD EFh 554 614 IPR002048 GO:0005509
Lal24g1134 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Lal24g1134 624 ProSitePatterns EF-hand calcium-binding domain. 597 609 IPR018247 -
Lal24g1134 624 PANTHER SERINE/THREONINE-PROTEIN KINASE 97 617 - -
Lal24g1134 624 MobiDBLite consensus disorder prediction 22 105 - -
Lal24g1134 624 CDD EFh 483 543 IPR002048 GO:0005509
Lal24g1134 624 ProSiteProfiles EF-hand calcium-binding domain profile. 550 585 IPR002048 GO:0005509
Lal24g1134 624 Gene3D Transferase(Phosphotransferase) domain 1 252 430 - -
Lal24g1134 624 ProSiteProfiles EF-hand calcium-binding domain profile. 514 549 IPR002048 GO:0005509
Lal24g1134 624 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 97 617 - -
Lal24g1134 624 ProSitePatterns Protein kinases ATP-binding region signature. 172 195 IPR017441 GO:0005524
Lal24g1134 624 Pfam EF-hand domain pair 553 614 IPR002048 GO:0005509
Lal24g1134 624 Pfam EF-hand domain pair 483 543 IPR002048 GO:0005509
Lal24g1134 624 SMART serkin_6 166 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g1134 624 ProSiteProfiles EF-hand calcium-binding domain profile. 587 619 IPR002048 GO:0005509
Lal24g1134 624 SMART efh_1 588 616 IPR002048 GO:0005509
Lal24g1134 624 SMART efh_1 554 582 IPR002048 GO:0005509
Lal24g1134 624 SMART efh_1 518 546 IPR002048 GO:0005509
Lal24g1134 624 SMART efh_1 482 510 IPR002048 GO:0005509
Lal24g1134 624 Gene3D Phosphorylase Kinase; domain 1 168 251 - -
Lal24g1134 624 SUPERFAMILY Protein kinase-like (PK-like) 166 420 IPR011009 -
Lal24g1134 624 SUPERFAMILY EF-hand 475 614 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1134 Lal-Chr24 12150047 12155477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1134 1 621 EF-hand Containing Proteins AT2G38910 69.726 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal24g1134 Pkinase 8.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1134 K13412 - gmx:100813232 969.148