Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1132 ATGGCTGACGTCATCAATGAACCCTTCGCCACTATTTCAAATCCAAAACAGCTTGATGTGAAGCTTTTTAACCGTTGGAGTTTCGACGATATTAATGTTCATAGTGACATATCTCTAACTGATTACATTGGAGTGGATGCGTCTAAGCATGCGACATATGTTCCTCACACAGCTGGAAGGTATTCGGCCAAGCGATTCAGGAAAGCGCAATGCCCGATCGTTGAGAGACTCACAAACTCCCTCATGATGTACGGTCGAAACGATGACAAGAAGCTAATGGCTGTCAGTGTTATTAAATATGCTATGGAAATTATTCATTTATTGACTGATCTCGATCCTATTCATGTTATCGTTGATGCTGTCATTAACAGTGGTCCCCATGAAGATGATACTCGAATTGGTTCTGCCGGTGTTATAAGGATTGGTTCTTCTATCTTCTAA 441 0.4127 MADVINEPFATISNPKQLDVKLFNRWSFDDINVHSDISLTDYIGVDASKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMYGRNDDKKLMAVSVIKYAMEIIHLLTDLDPIHVIVDAVINSGPHEDDTRIGSAGVIRIGSSIF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1132 146 Pfam Ribosomal protein S7p/S5e 67 137 IPR023798 -
Lal24g1132 146 Gene3D Ribosomal protein S7 domain 3 142 IPR036823 -
Lal24g1132 146 PANTHER 40S RIBOSOMAL PROTEIN S5 10 140 - -
Lal24g1132 146 PANTHER RIBOSOMAL PROTEIN S7 10 140 IPR000235 GO:0006412
Lal24g1132 146 SUPERFAMILY Ribosomal protein S7 21 140 IPR036823 -
Lal24g1132 146 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 143 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1132 Lal-Chr24 12077297 12081212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1132 19 140 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 78.689 1.26e-71 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1132 K02989 - gmx:100815850 216.083