Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1116 ATGGCTGACGTCATCAATGAACCCTTCGCCACTATTTCAAATCCAAAACATCTTGATGTGAAGCTTTTTAACCGTTGGAGTTTCGACGATATTAATGTTCATAGTGACATATCTTTAACTGATTACAGTGGAGTGGGGGAGTCTAAGCATGCGACATATGTTCCTCATACAGCTGGAAGGTATTCGGCCAAGCGATTCAGGAAAGCACAATGTTTATAG 219 0.411 MADVINEPFATISNPKHLDVKLFNRWSFDDINVHSDISLTDYSGVGESKHATYVPHTAGRYSAKRFRKAQCL 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1116 72 PANTHER RIBOSOMAL PROTEIN S7 10 71 IPR000235 GO:0006412
Lal24g1116 72 Gene3D Ribosomal protein S7 domain 3 72 IPR036823 -
Lal24g1116 72 PANTHER 40S RIBOSOMAL PROTEIN S5 10 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1116 Lal-Chr24 11660873 11664778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1116 19 71 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 79.245 3.16e-26 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1116 K02989 - gmx:100815850 100.138