Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1100 ATGTGTCGTTGGATGAAATTATTGGATGACCTGTTACTTGCCAGTGACCTTTTAGAAGTCGGTTTGGTGGGGGATGACTTCTGTACAGAAGTCGGTTTCGGAGAGTGTGACTTCTATAGAGAAGTCGGTTTGGGGAGGGGCGACTTCTATAGAGAAGTCGGTTTGGGGAGGGGCGACTTCTATAGAGAAGTCGGTTTGGGGAGGGGCGACTACCAAGAGAAGTCAGTTTGGCAGTGTGTGACTTCTCTTGAGAAGTCGGTTTGGCGAGACTTTAGATACATATACAAAACAACACTGCAGAGACTTTGGATGGAAGAAGAAATGAACTTGAATCATGAAATACCAGAGGCTGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAGGAGTTTGATTTTGAAGAAATTGAGTTTGGATCATTAAACGAAGATGAAGTAAAGAAATATAGGTTTGCAAACAATGATATTGCATATAATTTTTATAAGATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAAGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTTAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACGCAGAATCAACATTACAATACCTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACTGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAACGTACGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATAAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGAGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGATTTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATCTCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTATGCTGGTTTGCATACGACATCACGTTGCGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTGATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCTGCTTCCATATATACTAGAGTTATTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAGATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTGTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAACCAATAGATATGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAATGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGTTCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAAGTGAGAGTACCGGGGATTACCTCAAGGTCCAAGCGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGGAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 2514 0.3771 MCRWMKLLDDLLLASDLLEVGLVGDDFCTEVGFGECDFYREVGLGRGDFYREVGLGRGDFYREVGLGRGDYQEKSVWQCVTSLEKSVWRDFRYIYKTTLQRLWMEEEMNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIEFGSLNEDEVKKYRFANNDIAYNFYKMYGMKKGFGIRKYHTRRDKDGEILWQSFFCDREGFRDKKNELVRKKAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIGNGDAESTLQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSIKNAIKRIFPATHHRLCAWHICNNAEKNIKKNNFHKDFQKVMYADVEIDDFNMMWEELIAKHALHNNAWASQIFDCRSMWARSYIRGKFYAGLHTTSRCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVIFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKRWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFVLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVKTNRYGALSDACRVLCNLACEMEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVDQVRDPVRVRAKVRVPGITSRSKRGNQCGICREIGHNRGSCPNIVGSCSRTFDNDFNEE 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1100 837 Pfam MULE transposase domain 371 465 IPR018289 -
Lal24g1100 837 PANTHER OS02G0262500 PROTEIN 151 809 - -
Lal24g1100 837 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 151 809 IPR031052 GO:0006355
Lal24g1100 837 Pfam FAR1 DNA-binding domain 163 251 IPR004330 -
Lal24g1100 837 ProSiteProfiles Zinc finger SWIM-type profile. 648 686 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1100 Lal-Chr24 11444400 11447185 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal24g1100 MULE 1.9e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1100 - - lang:109350553 635.565